RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TAS2R8Q9NYW2 309 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 NBEAL2Q6ZNJ1 2754 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 GGCTO75223 188 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 PPYP01298 95 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 CRYGCP07315 174 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 FGF2P09038 288 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 ZNF735P0CB33 412 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 RPL27AP46776 148 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 TAS2R31P59538 309 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 RPL8P62917 257 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 EIF4EBP1Q13541 118 aaPredicted RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 NEDD8Q15843 81 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 C15orf32Q32M92 178 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR5AP2Q8NGF4 316 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR13F1Q8NGS4 319 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 SECTM1Q8WVN6 248 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 FYTTD1Q96QD9 318 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 SRSF8Q9BRL6 282 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 TM2D3Q9BRN9 247 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 AUNIPQ9H7T9 357 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 TUBA4BQ9H853 241 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 TECRQ9NZ01 308 aaKnown RBP8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 TNCP24821 2201 aa8.29□□□□□ -1.08
VTI1BP3-201ENST00000550220 LGALS9O00182 355 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 CYB5BO43169 146 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 XRCC3O43542 346 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR2J3O76001 311 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 HPRT1P00492 218 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 TRBV12-3P01733 135 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 IFNA6P05013 189 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 DEFA4P12838 97 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 NQO2P16083 231 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 HLA-GP17693 338 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 PSMB6P28072 239 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 ZNF45Q02386 682 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 KLK9Q2XQG4 91 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR2B11Q5JQS5 317 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 GPHB5Q86YW7 130 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 SPAG16Q8N0X2 631 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR5H6Q8NGV6 325 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 SLC25A38Q96DW6 304 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 CITED4Q96RK1 184 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 SPATA25Q9BR10 227 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 SLC5A7Q9GZV3 580 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 CCL28Q9NRJ3 127 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 SLC2A8Q9NY64 477 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 THYN1Q9P016 225 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 KLK9Q9UKQ9 250 aa8.28□□□□□ -1.08
VTI1BP3-201ENST00000550220 KMT2CQ8NEZ4 4911 aaKnown RBP8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 BMPR1BO00238 502 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 PRH1P02810 166 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 IL6RP08887 468 aaPredicted RBP8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 CLEC2LP0C7M8 214 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 LYL1P12980 280 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 HERV-K104P61576 105 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 POU2AF1Q16633 256 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 THOC7Q6I9Y2 204 aaKnown RBP8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 DHRS11Q6UWP2 260 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 HSD17B13Q7Z5P4 300 aaPredicted RBP8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 HAPLN4Q86UW8 402 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 GVQW1Q8N7I0 195 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 DYNLRB2Q8TF09 96 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 EEF1AKMT3Q96AZ1 226 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 CXorf58Q96LI9 332 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 COMMD5Q9GZQ3 224 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 PLEKHA2Q9HB19 425 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 HRASLSQ9HDD0 168 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 PALMDQ9NP74 551 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 IFT46Q9NQC8 304 aa8.27□□□□□ -1.09
VTI1BP3-201ENST00000550220 A0A087WXM4 84 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 HMX3A6NHT5 357 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 TNFSF12O43508 249 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 RBMXL2O75526 392 aaKnown RBP8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 TPPPO94811 219 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 CTRB1P17538 263 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 TAS2R46P59540 309 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 DEFA5Q01523 94 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 UBE2NLQ5JXB2 153 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 C10orf55Q5SWW7 151 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 CASC10Q5T4H9 136 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 CTRB2Q6GPI1 263 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR4A47Q6IF82 309 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 SSX9Q7RTT3 188 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 CMTM1Q8IZ96 169 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 CADM3Q8N126 398 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 ISOC1Q96CN7 298 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 THAP7Q9BT49 309 aaPredicted RBP8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 RNF167Q9H6Y7 350 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 COMMD9Q9P000 198 aa8.26□□□□□ -1.09
VTI1BP3-201ENST00000550220 SMIM31A0A1B0GVY4 71 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 SULT1C2O00338 296 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms