RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 LINC00299Q6ZSB3 139 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 SSX9Q7RTT3 188 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 LFNGQ8NES3 379 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 R3HDM4Q96D70 268 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 ZNF430Q9H8G1 570 aaPredicted RBP11.74□□□□□ -0.53
GPN3-206ENST00000549963 TPSG1Q9NRR2 321 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
GPN3-206ENST00000549963 A0A1W2PN81 502 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 ATG12O94817 140 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
GPN3-206ENST00000549963 RPA2P15927 270 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 PPIFP30405 207 aaKnown RBP11.73□□□□□ -0.53
GPN3-206ENST00000549963 CHRNA7P36544 502 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 PUSL1Q8N0Z8 303 aaKnown RBP11.73□□□□□ -0.53
GPN3-206ENST00000549963 MINDY2Q8NBR6 621 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 FAM103A1Q9BTL3 118 aaKnown RBP11.73□□□□□ -0.53
GPN3-206ENST00000549963 SRRQ9GZT4 340 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
GPN3-206ENST00000549963 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 MSGN1A6NI15 193 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 CENPXA8MT69 81 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 ARPC1BO15143 372 aaKnown RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 SNAPC5O75971 98 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 S1PR2O95136 353 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 EGR2P11161 476 aaPredicted RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 PI3P19957 117 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 RPL23AP62750 156 aaKnown RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 CFHR3Q02985 330 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 POU2AF1Q16633 256 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 OR4A47Q6IF82 309 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 FAM110DQ8TAY7 271 aaPredicted RBP11.72□□□□□ -0.53
GPN3-206ENST00000549963 S100ZQ8WXG8 99 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 FBXO7Q9Y3I1 522 aa11.72□□□□□ -0.53
GPN3-206ENST00000549963 TNCP24821 2201 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 KRASP01116 189 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 IGLV1-40P01703 118 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.53
GPN3-206ENST00000549963 PSMB8P28062 276 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 CDX1P47902 265 aaPredicted RBP11.71□□□□□ -0.53
GPN3-206ENST00000549963 RAB9AP51151 201 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 NDPQ00604 133 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.53
GPN3-206ENST00000549963 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 ZNF695Q8IW36 515 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 CADM3Q8N126 398 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
GPN3-206ENST00000549963 TRIM63Q969Q1 353 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 SLA2Q9H6Q3 261 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 GPR132Q9UNW8 380 aa11.71□□□□□ -0.53
GPN3-206ENST00000549963 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 H0Y980 276 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 H3BUA1 57 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 UPK2O00526 184 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 PF4P02776 101 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 FGF2P09038 288 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 HLA-GP17693 338 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
GPN3-206ENST00000549963 ZNF585BQ52M93 769 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 KLHL30-AS1Q8NEE0 82 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 OR5T1Q8NG75 326 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 UBE2E2Q96LR5 201 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
GPN3-206ENST00000549963 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
GPN3-206ENST00000549963 ANK2Q01484 3957 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 ADARB2-AS1A8MUL3 147 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 TSPAN15O95858 294 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 G6PCP35575 357 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 DHODHQ02127 395 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 TRIM16LQ309B1 348 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 FYTTD1Q96QD9 318 aaKnown RBP11.69□□□□□ -0.54
GPN3-206ENST00000549963 RTBDNQ9BSG5 229 aaPredicted RBP11.69□□□□□ -0.54
GPN3-206ENST00000549963 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
GPN3-206ENST00000549963 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms