RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 KRTAP1-1Q07627 177 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 HABP2Q14520 560 aaPredicted RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 SMCO1Q147U7 214 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RTL8BQ17RB0 113 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 ZFP69Q49AA0 526 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 LRRC37A5PQ49AS3 106 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 DHRS7BQ6IAN0 325 aaPredicted RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 C11orf87Q6NUJ2 197 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 SSX9Q7RTT3 188 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 MOB3BQ86TA1 216 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 NOXA1Q86UR1 476 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 OR8H3Q8N146 312 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 GRPEL2Q8TAA5 225 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RITA1Q96K30 269 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 HARBI1Q96MB7 349 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RNF126Q9BV68 326 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 C11orf1Q9H5F2 150 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 GSKIPQ9P0R6 139 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RCL1Q9Y2P8 373 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 NSG2Q9Y328 171 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 SOX21Q9Y651 276 aaPredicted RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 MAP1AP78559 2803 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 ACANP16112 2415 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 PIGBOS1A0A0B4J2F0 54 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 OOSP1A8MZH6 123 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 H7C2Y5 167 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 J3QLI3 93 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 K7EPK0 472 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SMAD7O15105 426 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SHOXO15266 292 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SCGB1D2O95969 90 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 FSHBP01225 129 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SAA1P0DJI8 122 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 LYL1P12980 280 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 CNTFRP26992 372 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 PSMB6P28072 239 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 MC5RP33032 325 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 EIF2B2P49770 351 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 RAB13P51153 203 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 LGALS4P56470 323 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 TAGLNQ01995 201 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 ID3Q02535 119 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SSX2Q16385 188 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 MRGPRG-AS1Q2M3A8 158 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 CXorf66Q5JRM2 361 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 CYB5R2Q6BCY4 276 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 THOC7Q6I9Y2 204 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 BRD3OSQ6XYD6 125 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 H2BFWTQ7Z2G1 175 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 FAM71E2Q8N5Q1 922 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 OR1S1Q8NH92 325 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 OSR1Q8TAX0 266 aaPredicted RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 FLYWCH2Q96CP2 140 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 RRNAD1Q96FB5 475 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 RHOVQ96L33 236 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SPIN2AQ99865 258 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 SPIN2BQ9BPZ2 258 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 TMEM140Q9NV12 185 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 OR5AC2Q9NZP5 309 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 MBD2Q9UBB5 411 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 POMT1Q9Y6A1 747 aa6.49□□□□□ -1.37
DEPDC4-207ENST00000549249 FXYD6-FXYD2A0A087WZ82 144 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 FAM90A9PA6NNJ1 464 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 DEDDO75618 318 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 ATG12O94817 140 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 HRASP01112 189 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 SNRNP70P08621 437 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 SLC25A4P12235 298 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 MYOD1P15172 320 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 CD24P25063 80 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 CD1BP29016 333 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 ADMP35318 185 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 NKX2-1P43699 371 aaPredicted RBP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 OR2B8PP59922 312 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 S100A10P60903 97 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 ERVK-16P61578 105 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 RPS16P62249 146 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 POLR2GP62487 172 aaKnown RBP eCLIP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 FAM120AOSQ5T036 256 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 GPR157Q5UAW9 335 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 LAMTOR1Q6IAA8 161 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 FOXRED2Q8IWF2 684 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 C9orf62Q8N4C0 152 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 OR4C13Q8NGP0 309 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 MALSU1Q96EH3 234 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 MS4A7Q9GZW8 240 aaPredicted RBP6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 COA4Q9NYJ1 87 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 BET1LQ9NYM9 111 aa6.48□□□□□ -1.37
DEPDC4-207ENST00000549249 A0A0U1RQK1 487 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 RNF222A6NCQ9 220 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 MSGN1A6NI15 193 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 C15orf61A6NNL5 157 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms