RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CRYZL1O95825 349 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 EXOSC2Q13868 293 aaKnown RBP9.72□□□□□ -0.85
PTCH1-218ENST00000548945 CDK10Q15131 360 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 CD300EQ496F6 205 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-218ENST00000548945 IDNKQ5T6J7 187 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 SLC25A42Q86VD7 318 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 NR2C2APQ86WQ0 139 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 S100ZQ8WXG8 99 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 NEURL2Q9BR09 285 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 GINS4Q9BRT9 223 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 ZC4H2Q9NQZ6 224 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.85
PTCH1-218ENST00000548945 IFITM5A6NNB3 132 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 LINC00473A8K010 186 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 ACTL6BO94805 426 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 APELAP0DMC3 54 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 HIST1H1DP16402 221 aaKnown RBP9.71□□□□□ -0.86
PTCH1-218ENST00000548945 RAB6AP20340 208 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF45Q02386 682 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 DEFB114Q30KQ6 69 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 MMD2Q8IY49 270 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF430Q9H8G1 570 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-218ENST00000548945 PLEKHA3Q9HB20 300 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.86
PTCH1-218ENST00000548945 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
PTCH1-218ENST00000548945 LGALS9O00182 355 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 RAB27BO00194 218 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 RGS5O15539 181 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 SLC22A5O76082 557 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-218ENST00000548945 GNB3P16520 340 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 SCAND1P57086 179 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 PLA2G7Q13093 441 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 ARL6IP1Q15041 203 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 HES5Q5TA89 166 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 RETNQ9HD89 108 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF257Q9Y2Q1 563 aa9.7□□□□□ -0.86
PTCH1-218ENST00000548945 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-218ENST00000548945 METTL21EPA6NDL7 271 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-218ENST00000548945 C2orf70A6NJV1 201 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 CTDSP2O14595 271 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
PTCH1-218ENST00000548945 PRH1P02810 166 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-218ENST00000548945 DTYMKP23919 212 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 TALDO1P37837 337 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 KIR2DS2P43631 304 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 WDR12Q9GZL7 423 aaKnown RBP9.69□□□□□ -0.86
PTCH1-218ENST00000548945 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 PRELID3BQ9Y3B1 194 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 DMRT1Q9Y5R6 373 aa9.69□□□□□ -0.86
PTCH1-218ENST00000548945 OR11H12B2RN74 326 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 CD7P09564 240 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 CTXN2P0C2S0 81 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 FOLR2P14207 255 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 MAS1LP35410 378 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 ETV6P41212 452 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF846Q147U1 533 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 SPANXN2Q5MJ10 180 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 DEFB125Q8N687 156 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 CMTM3Q96MX0 182 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 SPATA2Q9UM82 520 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 MRPS7Q9Y2R9 242 aaKnown RBP9.68□□□□□ -0.86
PTCH1-218ENST00000548945 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
PTCH1-218ENST00000548945 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 HPGDSO60760 199 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 FCGR3BO75015 233 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 OR2J3O76001 311 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 TNFSF8P32971 234 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 C10orf55Q5SWW7 151 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 SLC16A13Q7RTY0 426 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 CCDC190Q86UF4 302 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 MFSD4AQ8N468 514 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 SAMD12Q8N8I0 201 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 LGALS14Q8TCE9 139 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
PTCH1-218ENST00000548945 IGKV1D-8A0A087WSZ0 117 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms