RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 HARBI1Q96MB7 349 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 CITED4Q96RK1 184 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 QTRT1Q9BXR0 403 aaKnown RBP10.94□□□□□ -0.66
PTCH1-215ENST00000547672 MS4A7Q9GZW8 240 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-215ENST00000547672 DPM3Q9P2X0 92 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 OR51B2Q9Y5P1 312 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 RAB19A4D1S5 217 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 FBXO24O75426 580 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 IFNA10P01566 189 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 METTL15P1P0C7V9 234 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 MAS1LP35410 378 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 F2RL1P55085 397 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 LGALS4P56470 323 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 RAB2AP61019 212 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 ARF6P62330 175 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 SERF2P84101 59 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 MINOS1Q5TGZ0 78 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 UQCC3Q6UW78 93 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 C1orf229Q6ZS94 237 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-215ENST00000547672 HSD17B13Q7Z5P4 300 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 PARP11Q9NR21 331 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-215ENST00000547672 MINOS1-NBL1R4GNA1 71 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
PTCH1-215ENST00000547672 ADGRG4Q8IZF6 3080 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 A0A1W2PN81 502 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 C22orf46C9J442 243 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 KALRNO60229 2985 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 PRH1P02810 166 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 FAM157CP0CG43 387 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 CHRNA7P36544 502 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 HOXA1P49639 335 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-215ENST00000547672 SUB1P53999 127 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCH1-215ENST00000547672 ATP5J2P56134 94 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 ERHP84090 104 aaKnown RBP10.92□□□□□ -0.66
PTCH1-215ENST00000547672 SLC38A11Q08AI6 406 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 UTF1Q5T230 341 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 IL34Q6ZMJ4 242 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 MOB3BQ86TA1 216 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 PNKDQ8N490 385 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM167AQ8TBQ9 72 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 PSMG3Q9BT73 122 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM147Q9BVK8 224 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 PLEKHA3Q9HB20 300 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 LPAR2Q9HBW0 351 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 WFDC1Q9HC57 220 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 TCF19Q9Y242 345 aa10.92□□□□□ -0.66
PTCH1-215ENST00000547672 ARID1AO14497 2285 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 IGHV1-3A0A0C4DH29 117 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 IGHV2-70DA0A0C4DH43 119 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 KRBOX1C9JBD0 128 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 H3BP45 60 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 MPDU1O75352 247 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 ACTL6BO94805 426 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 MBP02144 154 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 ARG1P05089 322 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 CD1BP29016 333 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 LMO4P61968 165 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 RPL8P62917 257 aaKnown RBP10.91□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM267Q0VDI3 215 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-215ENST00000547672 LRRC75BQ2VPJ9 315 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 FAM74A1Q5RGS3 127 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 CLEC9AQ6UXN8 241 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 VKORC1L1Q8N0U8 176 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 ZNF525Q8N782 197 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 OR2G3Q8NGZ4 309 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 UQCC1Q9NVA1 299 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 TIMM9Q9Y5J7 89 aa10.91□□□□□ -0.66
PTCH1-215ENST00000547672 MALRD1Q5VYJ5 2156 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 BTBD17A6NE02 478 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 FNDC10F2Z333 226 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 C17orf112F2Z3M2 114 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 NDUFS7O75251 213 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 COX7A1P24310 79 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 SNCAP37840 140 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 VDAC2P45880 294 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-215ENST00000547672 REG1BP48304 166 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 CAMLGP49069 296 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-215ENST00000547672 OR2B8PP59922 312 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 PRCDQ00LT1 54 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 RAB31Q13636 194 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 TPTE2P1Q5T6R2 138 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 Q8N7P7 452 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 HSD17B11Q8NBQ5 300 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms