RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CREBL2O60519 120 aaPredicted RBP10.11□□□□□ -0.79
CPSF6-204ENST00000547486 KBTBD11O94819 623 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 HLA-AP01891 365 aaKnown RBP10.11□□□□□ -0.79
CPSF6-204ENST00000547486 ZNF735P0CB33 412 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 AREGP15514 252 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 NEDD8Q15843 81 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 HAGHQ16775 308 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 ZNF66Q6ZN08 573 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 BEST4Q8NFU0 473 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 FANCD2OSQ96PS1 177 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 FYTTD1Q96QD9 318 aaKnown RBP10.11□□□□□ -0.79
CPSF6-204ENST00000547486 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 AUNIPQ9H7T9 357 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 ETV7Q9Y603 341 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 CGB1A6NKQ9 187 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 ZNF785A8K8V0 405 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 NDUFB8O95169 186 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 LYL1P12980 280 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 TGFBR1P36897 503 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 RPL27AP46776 148 aaKnown RBP10.1□□□□□ -0.79
CPSF6-204ENST00000547486 SCAND1P57086 179 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 CD300EQ496F6 205 aaPredicted RBP10.1□□□□□ -0.79
CPSF6-204ENST00000547486 SSX9Q7RTT3 188 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 Q8N402 240 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 OR13F1Q8NGS4 319 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 SECTM1Q8WVN6 248 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 GAR1Q9NY12 217 aaKnown RBP10.1□□□□□ -0.79
CPSF6-204ENST00000547486 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 S4R3C0 116 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 DNAH7Q8WXX0 4024 aa10.1□□□□□ -0.79
CPSF6-204ENST00000547486 NPIPB5A8MRT5 1133 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 SULT1C2O00338 296 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 AIREO43918 545 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 OR2C1O95371 312 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 PPYP01298 95 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 CRYGCP07315 174 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 PSMB6P28072 239 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 ARPC4P59998 168 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 LCN12Q6JVE5 192 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 SLC25A42Q86VD7 318 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
CPSF6-204ENST00000547486 A0A0A6YYH2 397 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 TRAV3A0A0B4J244 114 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 MEIS3P1A6NDR6 274 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 A6NJ64 397 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 HRASP01112 189 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 REG1AP05451 166 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 FOLR2P14207 255 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 CTRB1P17538 263 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 MAS1LP35410 378 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 MSMO1Q15800 293 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 KLK9Q2XQG4 91 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 CTRB2Q6GPI1 263 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 OR4A47Q6IF82 309 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
CPSF6-204ENST00000547486 GTSCR1Q86UQ5 136 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
CPSF6-204ENST00000547486 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 SLC5A7Q9GZV3 580 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 TUBA4BQ9H853 241 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 SELENOKQ9Y6D0 94 aa10.08□□□□□ -0.8
CPSF6-204ENST00000547486 DPPA5A6NC42 116 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 GGCTO75223 188 aaKnown RBP10.07□□□□□ -0.8
CPSF6-204ENST00000547486 CD7P09564 240 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 HLA-GP17693 338 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 RPS19P39019 145 aaKnown RBP10.07□□□□□ -0.8
CPSF6-204ENST00000547486 KIR2DS2P43631 304 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 FXYD4P59646 89 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 OR2B8PP59922 312 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 RPL8P62917 257 aaKnown RBP10.07□□□□□ -0.8
CPSF6-204ENST00000547486 TIMM50Q3ZCQ8 353 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 CLEC19AQ6UXS0 136 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 ZBTB34Q8NCN2 500 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 OR5AP2Q8NGF4 316 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 PLEKHA3Q9HB20 300 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
CPSF6-204ENST00000547486 LGALS9O00182 355 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPSF6-204ENST00000547486 XRCC3O43542 346 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 GNRHRP30968 328 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 CD81P60033 236 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 KCTD21Q4G0X4 260 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 DEFB125Q8N687 156 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms