RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NAA60Q9H7X0 242 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 BET1LQ9NYM9 111 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 TRRAPQ9Y4A5 3859 aa16.33■□□□□ 0.21
SCARB1-211ENST00000546215 KRASP01116 189 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 SERPINE2P07093 398 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 CRIP2P52943 208 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-211ENST00000546215 GNB1P62873 340 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 CFHR3Q02985 330 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 RBMS2Q15434 407 aaKnown RBP16.33■□□□□ 0.2
SCARB1-211ENST00000546215 SP6Q3SY56 376 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 MMD2Q8IY49 270 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 C11orf44Q8N8P7 122 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 DMBX1Q8NFW5 382 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 NUBP2Q9Y5Y2 271 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 WSB1Q9Y6I7 421 aa16.33■□□□□ 0.2
SCARB1-211ENST00000546215 TEX13DA0A0J9YY54 714 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-211ENST00000546215 G3V318 75 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 B3GALNT1O75752 331 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 CNIH1O95406 144 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 CD28P10747 220 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 RPA2P15927 270 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 UCP1P25874 307 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 G6PCP35575 357 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 CADM3Q8N126 398 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 OR4A5Q8NH83 315 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 SGMS2Q8NHU3 365 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 ARPC1AQ92747 370 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 FAM103A1Q9BTL3 118 aaKnown RBP16.32■□□□□ 0.2
SCARB1-211ENST00000546215 GON7Q9BXV9 100 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 TMEM140Q9NV12 185 aa16.32■□□□□ 0.2
SCARB1-211ENST00000546215 LYRM1O43325 122 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 CREBL2O60519 120 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-211ENST00000546215 UPK1BO75841 260 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 OR5AC1P0C628 307 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 VDAC1P21796 283 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 PPIFP30405 207 aaKnown RBP16.31■□□□□ 0.2
SCARB1-211ENST00000546215 SLC35B1P78383 322 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 TNXAQ16473 311 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 C19orf54Q5BKX5 351 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 TCTEX1D4Q5JR98 221 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 HIST2H2BDQ6DRA6 164 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 GRPEL2Q8TAA5 225 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 ABHD5Q8WTS1 349 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 SEC22AQ96IW7 307 aa16.31■□□□□ 0.2
SCARB1-211ENST00000546215 TRAV3A0A0B4J244 114 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 TRAV41A0A0B4J266 112 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 FBXO24O75426 580 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 NDUFB6O95139 128 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 AKR1C4P17516 323 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 ERVK-16P61578 105 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 IFITM3Q01628 133 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 SGPP2Q8IWX5 399 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 GLYATL2Q8WU03 294 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 GALNT14Q96FL9 552 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 TMEM222Q9H0R3 208 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 TBC1D24Q9ULP9 559 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 UPK2O00526 184 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 RPL8P62917 257 aaKnown RBP16.3■□□□□ 0.2
SCARB1-211ENST00000546215 SUPT4H1P63272 117 aaKnown RBP16.3■□□□□ 0.2
SCARB1-211ENST00000546215 CD83Q01151 205 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 ECSCRQ19T08 205 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 AKIRIN2Q53H80 203 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 TMED4Q7Z7H5 227 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 MINDY2Q8NBR6 621 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 LFNGQ8NES3 379 aa16.3■□□□□ 0.2
SCARB1-211ENST00000546215 ACTL6BO94805 426 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 CDS2O95674 445 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 MAS1LP35410 378 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 TMEM267Q0VDI3 215 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-211ENST00000546215 C10orf55Q5SWW7 151 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 OR4X2Q8NGF9 303 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 SRSF12Q8WXF0 261 aaKnown RBP16.29■□□□□ 0.2
SCARB1-211ENST00000546215 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
SCARB1-211ENST00000546215 IGHG4P01861 327 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 DHODHQ02127 395 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 TRIM16LQ309B1 348 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 TMEM128Q5BJH2 165 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 TEX38Q6PEX7 206 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 COMMD1Q8N668 190 aa16.28■□□□□ 0.2
SCARB1-211ENST00000546215 CITED2Q99967 270 aaPredicted RBP16.28■□□□□ 0.2
SCARB1-211ENST00000546215 MSGN1A6NI15 193 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 E7EUB6 86 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 IGKV1-5P01602 117 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 FGF2P09038 288 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 OR9G9P0C7N8 305 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 HLA-GP17693 338 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 SLC6A1P30531 599 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 ASAH1Q13510 395 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 TMEM187Q14656 261 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 ASPHD1Q5U4P2 390 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 UNQ5815/PRO19632Q6UWF5 114 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 CENPSQ8N2Z9 138 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 LHFPL5Q8TAF8 219 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 FLVCR2Q9UPI3 526 aa16.27■□□□□ 0.2
SCARB1-211ENST00000546215 SOX15O60248 233 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 IGLV1-40P01703 118 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 MYOD1P15172 320 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 TMEM56Q96MV1 263 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 TMEM56-RWDD3S4R434 201 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms