RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 CCNKO75909 580 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 GABARAPO95166 117 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 BRI3O95415 125 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 CSN3P07498 182 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 M6PRP20645 277 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 CRHBPP24387 322 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 OR10A3P58181 314 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 SSX1Q16384 188 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 SGPP2Q8IWX5 399 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 SLC7A5P1Q8MH63 180 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 SPARTQ8N0X7 666 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 TEX45Q8NA69 505 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 OR10R2Q8NGX6 335 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 OR10J5Q8NHC4 309 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 DDB2Q92466 427 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 THAP7Q9BT49 309 aaPredicted RBP6.44□□□□□ -1.38
USP28-215ENST00000545608 ACOT13Q9NPJ3 140 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 COA4Q9NYJ1 87 aa6.44□□□□□ -1.38
USP28-215ENST00000545608 LCE6AA0A183 80 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 IZUMO1RA6ND01 250 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 LINC00473A8K010 186 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 H0Y980 276 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 CRYZL1O95825 349 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 PRH1P02810 166 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 OR9G9P0C7N8 305 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 TRAPPC2P0DI81 140 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 TRAPPC2BP0DI82 140 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 HIST1H1DP16402 221 aaKnown RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 AADACP22760 399 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 DUTP33316 252 aaKnown RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 UBE2KP61086 200 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 TNXAQ16473 311 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 PRSS8Q16651 343 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 HAGHQ16775 308 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 RTL8BQ17RB0 113 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 IDO2Q6ZQW0 420 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 H1FOOQ8IZA3 346 aaPredicted RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 ADAD2Q8NCV1 583 aaKnown RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 MCFD2Q8NI22 146 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 USMG5Q96IX5 58 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 PHB2Q99623 299 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 ARPC5LQ9BPX5 153 aa6.43□□□□□ -1.38
USP28-215ENST00000545608 ELF5Q9UKW6 265 aaPredicted RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 RBM7Q9Y580 266 aaKnown RBP6.43□□□□□ -1.38
USP28-215ENST00000545608 TRAV1-2A0A0B4J238 106 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 IFITM5A6NNB3 132 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 PDCD5O14737 125 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 DIRAS3O95661 229 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 RRASP10301 218 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 GADD45AP24522 165 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 ARFRP1Q13795 201 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 TATDN3Q17R31 274 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 RPEL1Q2QD12 228 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 VMA21Q3ZAQ7 101 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 ADAMTSL5Q6ZMM2 481 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 Q6ZS49 121 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 NR2C2APQ86WQ0 139 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 SRSF12Q8WXF0 261 aaKnown RBP6.42□□□□□ -1.38
USP28-215ENST00000545608 ADTRPQ96IZ2 230 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 GINS4Q9BRT9 223 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 NAA50Q9GZZ1 169 aaKnown RBP6.42□□□□□ -1.38
USP28-215ENST00000545608 ZNF430Q9H8G1 570 aaPredicted RBP6.42□□□□□ -1.38
USP28-215ENST00000545608 SIGLEC8Q9NYZ4 499 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 PRELID1Q9Y255 219 aa6.42□□□□□ -1.38
USP28-215ENST00000545608 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
USP28-215ENST00000545608 TRBV9A0A0B4J1U6 114 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 SMIM30A4D0T7 59 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 BMPR1BO00238 502 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 FCGR3BO75015 233 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 SAA1P0DJI8 122 aaPredicted RBP6.41□□□□□ -1.38
USP28-215ENST00000545608 RAB3BP20337 219 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 TALDO1P37837 337 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 RPL30P62888 115 aaKnown RBP6.41□□□□□ -1.38
USP28-215ENST00000545608 RHOGP84095 191 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 CDK10Q15131 360 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 TBCEQ15813 527 aaPredicted RBP6.41□□□□□ -1.38
USP28-215ENST00000545608 CDNFQ49AH0 187 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 SPANXN2Q5MJ10 180 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 C10orf55Q5SWW7 151 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 LCN12Q6JVE5 192 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 ZNF367Q7RTV3 350 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 Q8N402 240 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 OSR1Q8TAX0 266 aaPredicted RBP6.41□□□□□ -1.38
USP28-215ENST00000545608 ACOT12Q8WYK0 555 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 SNAPC3Q92966 411 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 CCDC32Q9BV29 185 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 ATG5Q9H1Y0 275 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 TUBA4BQ9H853 241 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 RBMX2Q9Y388 322 aaKnown RBP6.41□□□□□ -1.38
USP28-215ENST00000545608 TNCP24821 2201 aa6.41□□□□□ -1.38
USP28-215ENST00000545608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
USP28-215ENST00000545608 TRDV1A0A1B0GX56 115 aa6.4□□□□□ -1.38
USP28-215ENST00000545608 METTL21EPA6NDL7 271 aa6.4□□□□□ -1.38
USP28-215ENST00000545608 HMX3A6NHT5 357 aa6.4□□□□□ -1.38
USP28-215ENST00000545608 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms