RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	ANXA10	Q9UJ72	324 aa		5.94	□□□□□ -1.46
SNHG1-223	ENST00000545440	A3GALT2	U3KPV4	340 aa		5.94	□□□□□ -1.46
SNHG1-223	ENST00000545440		A0A087WXM4	84 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	LINC00473	A8K010	186 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	SEC14L6	B5MCN3	397 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	ARPC1B	O15143	372 aa	Known RBP	5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	AIRE	O43918	545 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	CREBL2	O60519	120 aa	Predicted RBP	5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	BRI3	O95415	125 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	CRYZL1	O95825	349 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	HLA-DQB1	P01920	261 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	NPS	P0C0P6	89 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	INSL3	P51460	131 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	TPPP2	P59282	170 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	UBE2K	P61086	200 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	VMA21	Q3ZAQ7	101 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	KCTD9	Q7L273	389 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	POC5	Q8NA72	575 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	LFNG	Q8NES3	379 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	TSPAN14	Q8NG11	270 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	OR1N2	Q8NGR9	330 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	GRPEL2	Q8TAA5	225 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	CLCC1	Q96S66	551 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	MLST8	Q9BVC4	326 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	SEPSECS	Q9HD40	501 aa	Known RBP	5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	SPATA2	Q9UM82	520 aa		5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	MRPS7	Q9Y2R9	242 aa	Known RBP	5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	RBMX2	Q9Y388	322 aa	Known RBP	5.93	□□□□□ -1.46
SNHG1-223	ENST00000545440	TRAV18	A0A075B6X5	111 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	IGKV1D-13	A0A0B4J2D9	117 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	TRIM64C	A6NLI5	447 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	SRRM4	A7MD48	611 aa	Known RBP	5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	LINC01619	G3V211	115 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	CNIH1	O95406	144 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	IGLV2-14	P01704	120 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	IGKV1-13	P0DP09	117 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	NFYA	P23511	347 aa	Predicted RBP	5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	ARPC4	P59998	168 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	MSMO1	Q15800	293 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	UBE2NL	Q5JXB2	153 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	TEX45	Q8NA69	505 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	BEST4	Q8NFU0	473 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	CASTOR1	Q8WTX7	329 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	YIPF6	Q96EC8	236 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	OR5B12	Q96R08	314 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	HSD17B10	Q99714	261 aa	Known RBP	5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	KRTAP4-12	Q9BQ66	201 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	AUNIP	Q9H7T9	357 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	DIABLO	Q9NR28	239 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	PRELID3B	Q9Y3B1	194 aa		5.92	□□□□□ -1.46
SNHG1-223	ENST00000545440	COL7A1	Q02388	2944 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	IGHV4OR15-8	A0A075B7B6	117 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440		A0A087WW49	117 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	OVOL1	O14753	267 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	XRCC3	O43542	346 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	FCGR3B	O75015	233 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	TRGV3	P03979	118 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	HSPB1	P04792	205 aa	Known RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	IL6R	P08887	468 aa	Predicted RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	SAA1	P0DJI8	122 aa	Predicted RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	AADAC	P22760	399 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	TGFBR1	P36897	503 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	CBX5	P45973	191 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	PJVK	Q0ZLH3	352 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	CDK10	Q15131	360 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	PRSS8	Q16651	343 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	MRGPRG-AS1	Q2M3A8	158 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	ZNF66	Q6ZN08	573 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	ZNF429	Q86V71	674 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	HOGA1	Q86XE5	327 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	OR13F1	Q8NGS4	319 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	OR4S2	Q8NH73	311 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	VSTM2A	Q8TAG5	236 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	SRSF12	Q8WXF0	261 aa	Known RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	B9D2	Q9BPU9	175 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	ALX4	Q9H161	411 aa	Predicted RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	MGAT4C	Q9UBM8	478 aa		5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.91	□□□□□ -1.46
SNHG1-223	ENST00000545440		A0A0G2JLM5	398 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	C13orf42	A0A1B0GVH6	325 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	HMX3	A6NHT5	357 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440		J3QRK9	145 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	ACTL6B	O94805	426 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	KBTBD11	O94819	623 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	PPY	P01298	95 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	IGHV3-11	P01762	117 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	ZP3	P21754	424 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	FCGR2C	P31995	323 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	KIR2DS2	P43631	304 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	RPL30	P62888	115 aa	Known RBP	5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	TNXA	Q16473	311 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	DEFB121	Q5J5C9	76 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	TMEM69	Q5SWH9	247 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	IDO2	Q6ZQW0	420 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	MMD2	Q8IY49	270 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	GVQW1	Q8N7I0	195 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	SAMD12	Q8N8I0	201 aa		5.9	□□□□□ -1.46
SNHG1-223	ENST00000545440	ADAD2	Q8NCV1	583 aa	Known RBP	5.9	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms