RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 VSTM2AQ8TAG5 236 aa10.38□□□□□ -0.75
DDX11-227ENST00000544652 NPFFR1Q9GZQ6 430 aa10.38□□□□□ -0.75
DDX11-227ENST00000544652 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
DDX11-227ENST00000544652 METTL1Q9UBP6 276 aaKnown RBP10.38□□□□□ -0.75
DDX11-227ENST00000544652 KBTBD11O94819 623 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 OR2A4O95047 310 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 DUS4LO95620 317 aaKnown RBP10.37□□□□□ -0.75
DDX11-227ENST00000544652 HLA-AP01891 365 aaKnown RBP10.37□□□□□ -0.75
DDX11-227ENST00000544652 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 SRPXP78539 464 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 OXA1LQ15070 435 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 TRIM16LQ309B1 348 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 ANKRD55Q3KP44 614 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 LIN54Q6MZP7 749 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 SELENOHQ8IZQ5 122 aaKnown RBP10.37□□□□□ -0.75
DDX11-227ENST00000544652 VKORC1L1Q8N0U8 176 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 TMEM167AQ8TBQ9 72 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 RBPMSQ93062 196 aaKnown RBP10.37□□□□□ -0.75
DDX11-227ENST00000544652 OR2A7Q96R45 310 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 RASL11BQ9BPW5 248 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 ZNF702PQ9H963 129 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 TPSG1Q9NRR2 321 aa10.37□□□□□ -0.75
DDX11-227ENST00000544652 A0A0B4J2A0 478 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 PIGBOS1A0A0B4J2F0 54 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 DUXBA0A1W2PPF3 345 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 INMT-MINDY4F8WBC2 141 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 PRAF2O60831 178 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 ATG12O94817 140 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 NDUFA7O95182 113 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 KRASP01116 189 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 IGKV1-5P01602 117 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 IGHG2P01859 326 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 G6PCP35575 357 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 ERVK-16P61578 105 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
DDX11-227ENST00000544652 SRSF2Q01130 221 aaKnown RBP10.36□□□□□ -0.75
DDX11-227ENST00000544652 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 TMEM268Q5VZI3 342 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 Q6ZS46 218 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 Q6ZSV7 163 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 ZNF695Q8IW36 515 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 LGI3Q8N145 548 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 DMBX1Q8NFW5 382 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 MITD1Q8WV92 249 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 PRSS22Q9GZN4 317 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 C16orf95Q9H693 158 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 BEX1Q9HBH7 125 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 TMEM140Q9NV12 185 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 SHPKQ9UHJ6 478 aa10.36□□□□□ -0.75
DDX11-227ENST00000544652 IGHV7-81A0A0B4J1V7 117 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 UPK2O00526 184 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 FCN1O00602 326 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 DHFRP00374 187 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 CRYBA1P05813 215 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 RAB25P57735 213 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 PRSS8Q16651 343 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 SSX9Q7RTT3 188 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 MINDY2Q8NBR6 621 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 OR52B4Q8NGK2 314 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 ZNF431Q8TF32 576 aaPredicted RBP10.35□□□□□ -0.75
DDX11-227ENST00000544652 CASTOR1Q8WTX7 329 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 LSM10Q969L4 123 aaKnown RBP10.35□□□□□ -0.75
DDX11-227ENST00000544652 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 ZNF430Q9H8G1 570 aaPredicted RBP10.35□□□□□ -0.75
DDX11-227ENST00000544652 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 MMP24Q9Y5R2 645 aa10.35□□□□□ -0.75
DDX11-227ENST00000544652 A0A0G2JRQ6 117 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
DDX11-227ENST00000544652 DBX1A6NMT0 343 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 SNRPGP15A8MWD9 76 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 CREBL2O60519 120 aaPredicted RBP10.34□□□□□ -0.75
DDX11-227ENST00000544652 CA2P00918 260 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 HKR1P10072 659 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 VDAC1P21796 283 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 MAS1LP35410 378 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 PJVKQ0ZLH3 352 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 PLGLAQ15195 96 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 CHPT1Q8WUD6 406 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 SEC22CQ9BRL7 303 aa10.34□□□□□ -0.75
DDX11-227ENST00000544652 TRAV3A0A0B4J244 114 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 A0A0B4J293 547 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 LINC01548A6NM66 108 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 KCNAB3O43448 404 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 AKR1C2P52895 323 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
DDX11-227ENST00000544652 CX3CL1P78423 397 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 LYZL2Q7Z4W2 148 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
DDX11-227ENST00000544652 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms