RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LGALS7P47929 136 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 DYNLT3P51808 116 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 ZNF134P52741 427 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 RAP2BP61225 183 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 FGL1Q08830 312 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 GNMTQ14749 295 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 AARDQ4LEZ3 155 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 PRAMEF5Q5TYX0 476 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 Q6ZSV7 163 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 PDPNQ86YL7 162 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 C1QL4Q86Z23 238 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 ODF3L1Q8IXM7 274 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 ADAD2Q8NCV1 583 aaKnown RBP5.29□□□□□ -1.56
CDCA3-209ENST00000544610 OR5M8Q8NGP6 311 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 OR10X1Q8NGY0 326 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 OR4S2Q8NH73 311 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 OSR1Q8TAX0 266 aaPredicted RBP5.29□□□□□ -1.56
CDCA3-209ENST00000544610 DDB2Q92466 427 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 MALSU1Q96EH3 234 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 NMES1Q9C002 83 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 CCL28Q9NRJ3 127 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 DPM3Q9P2X0 92 aa5.29□□□□□ -1.56
CDCA3-209ENST00000544610 SAA2-SAA4A0A096LPE2 208 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 A0A0U1RQK1 487 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 A0A1B0GU03 582 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 FAM90A26D6RGX4 464 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 MMP23AO75900 390 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
CDCA3-209ENST00000544610 HRASP01112 189 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 APOA2P02652 100 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 OR5AC1P0C628 307 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 PET100P0DJ07 73 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 SAA2P0DJI9 122 aaPredicted RBP5.28□□□□□ -1.56
CDCA3-209ENST00000544610 CD1BP29016 333 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 ARF6P62330 175 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 CBX3Q13185 183 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 RTL8BQ17RB0 113 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 C2orf68Q2NKX9 166 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 PHLDA2Q53GA4 152 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 NMSQ5H8A3 153 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 AKAP14Q86UN6 197 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 TGIF2LXQ8IUE1 241 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 LYG1Q8N1E2 194 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 FGFRL1Q8N441 504 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 OR8H1Q8NGG4 311 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 OR4P4Q8NGL7 312 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 OR4C13Q8NGP0 309 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 VSTM2AQ8TAG5 236 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 CAPSLQ8WWF8 208 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 LHX4Q969G2 390 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 TP53RKQ96S44 253 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 NEURL2Q9BR09 285 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 PARP12Q9H0J9 701 aaKnown RBP5.28□□□□□ -1.56
CDCA3-209ENST00000544610 C16orf95Q9H693 158 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 ONECUT1Q9UBC0 465 aa5.28□□□□□ -1.56
CDCA3-209ENST00000544610 VGLL3A8MV65 326 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 M0R1X1 148 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 HSD17B6O14756 317 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 PFDN1O60925 122 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 CCNKO75909 580 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 TSPAN9O75954 239 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 SPDEFO95238 335 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 P0C879 139 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 CT45A6P0DMU7 189 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 CT45A5P0DMU8 189 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 CT45A7P0DMV0 189 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 NQO2P16083 231 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 PI3P19957 117 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ATP5IP56385 69 aaPredicted RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 IL15RAQ13261 267 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 EBI3Q14213 229 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 BEAN1Q3B7T3 259 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ANKRD55Q3KP44 614 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ZNF585BQ52M93 769 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 FBLN7Q53RD9 439 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 FAM209BQ5JX69 171 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 TPTE2P1Q5T6R2 138 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 KPRPQ5T749 579 aaPredicted RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 HCP5Q6MZN7 132 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 GSG1LQ6UXU4 331 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 VMO1Q7Z5L0 202 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ZNF695Q8IW36 515 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 FOXRED2Q8IWF2 684 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 SPAG16Q8N0X2 631 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 OR52E5Q8NH55 327 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 OR51H1Q8NH63 302 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 OR4A5Q8NH83 315 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 FAM110DQ8TAY7 271 aaPredicted RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 TCTEX1D2Q8WW35 142 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 RPEQ96AT9 228 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 RRNAD1Q96FB5 475 aaKnown RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 C2orf50Q96LR7 162 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 FYTTD1Q96QD9 318 aaKnown RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 SEC22CQ9BRL7 303 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ZNF436Q9C0F3 470 aaPredicted RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 MEGF9Q9H1U4 602 aa5.27□□□□□ -1.57
CDCA3-209ENST00000544610 RANBP3Q9H6Z4 567 aaPredicted RBP5.27□□□□□ -1.57
CDCA3-209ENST00000544610 ZNRD1Q9P1U0 126 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms