RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PFDN2Q9UHV9 154 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 NUP50Q9UKX7 468 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 TCF19Q9Y242 345 aa16.06■□□□□ 0.16
COPS7A-218ENST00000543939 STRAPQ9Y3F4 350 aaKnown RBP16.06■□□□□ 0.16
COPS7A-218ENST00000543939 ANKRD34BA5PLL1 514 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 LY6LH3BQJ8 138 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 ENSAO43768 121 aaKnown RBP16.05■□□□□ 0.16
COPS7A-218ENST00000543939 SAA1P0DJI8 122 aaPredicted RBP16.05■□□□□ 0.16
COPS7A-218ENST00000543939 VDAC2P45880 294 aaPredicted RBP16.05■□□□□ 0.16
COPS7A-218ENST00000543939 RAB13P51153 203 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 HBG1P69891 147 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 HBG2P69892 147 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 SH3BGRL3Q9H299 93 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 PRNDQ9UKY0 176 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 PMS2P5A8MQ11 134 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 ARG1P05089 322 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 HSPE1P61604 102 aaKnown RBP16.05■□□□□ 0.16
COPS7A-218ENST00000543939 HCP5Q6MZN7 132 aa16.05■□□□□ 0.16
COPS7A-218ENST00000543939 MFSD2BA6NFX1 497 aa16.04■□□□□ 0.16
COPS7A-218ENST00000543939 ATP6V0CP27449 155 aa16.04■□□□□ 0.16
COPS7A-218ENST00000543939 SAT2Q96F10 170 aaPredicted RBP16.04■□□□□ 0.16
COPS7A-218ENST00000543939 TSNAXQ99598 290 aaKnown RBP16.04■□□□□ 0.16
COPS7A-218ENST00000543939 UNKLQ9H9P5 680 aaKnown RBP16.04■□□□□ 0.16
COPS7A-218ENST00000543939 KPTNQ9Y664 436 aa16.04■□□□□ 0.16
COPS7A-218ENST00000543939 IGHV1-3A0A0C4DH29 117 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 A1L4Q6 167 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 ZNF705EA8MWA4 302 aaPredicted RBP16.03■□□□□ 0.16
COPS7A-218ENST00000543939 KBTBD11O94819 623 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 RPS16P62249 146 aaKnown RBP16.03■□□□□ 0.16
COPS7A-218ENST00000543939 LCN2P80188 198 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 SLC38A11Q08AI6 406 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 MS4A7Q9GZW8 240 aaPredicted RBP16.03■□□□□ 0.16
COPS7A-218ENST00000543939 ZNF257Q9Y2Q1 563 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 OR51B2Q9Y5P1 312 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 TNCP24821 2201 aa16.03■□□□□ 0.16
COPS7A-218ENST00000543939 IGHV2-70DA0A0C4DH43 119 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 C15orf62A8K5M9 175 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 ODF3BA8MYP8 253 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 TEX46H3BTG2 121 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 IGLV2-23P01705 113 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 AANATQ16613 207 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 LDLRAD2Q5SZI1 272 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 OR8G2PQ6IF36 304 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 FAM168AQ92567 244 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 RPEQ96AT9 228 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 CLCC1Q96S66 551 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 HIPK2Q9H2X6 1198 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 INSIG2Q9Y5U4 225 aa16.02■□□□□ 0.16
COPS7A-218ENST00000543939 IFNA5P01569 189 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 FGF2P09038 288 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 MYOD1P15172 320 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 ATP5J2P56134 94 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 KLRD1Q13241 179 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 LILRB2Q8N423 598 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 C10orf105Q8TEF2 133 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 GNPNAT1Q96EK6 184 aaPredicted RBP16.02■□□□□ 0.15
COPS7A-218ENST00000543939 PIMREGQ9BSJ6 248 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 SIRPDQ9H106 197 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 HEYLQ9NQ87 328 aaPredicted RBP16.02■□□□□ 0.15
COPS7A-218ENST00000543939 FKBP11Q9NYL4 201 aa16.02■□□□□ 0.15
COPS7A-218ENST00000543939 IGHV3-72A0A0B4J1Y9 119 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 VWC2LB2RUY7 222 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 NDUFS8O00217 210 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 HTR1DP28221 377 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 HOXA1P49639 335 aaPredicted RBP16.01■□□□□ 0.15
COPS7A-218ENST00000543939 TPTE2P1Q5T6R2 138 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 VMO1Q7Z5L0 202 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 HSD17B13Q7Z5P4 300 aaPredicted RBP16.01■□□□□ 0.15
COPS7A-218ENST00000543939 OR4A5Q8NH83 315 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 VSTM2AQ8TAG5 236 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 TMEM167AQ8TBQ9 72 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 MMP26Q9NRE1 261 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 RFNGQ9Y644 331 aa16.01■□□□□ 0.15
COPS7A-218ENST00000543939 LGALS7P47929 136 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 RPP30P78346 268 aaKnown RBP16■□□□□ 0.15
COPS7A-218ENST00000543939 RUNX1Q01196 453 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 ATP6V1FQ16864 119 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 MOB3BQ86TA1 216 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 EIF4E3Q8N5X7 224 aaKnown RBP16■□□□□ 0.15
COPS7A-218ENST00000543939 OR10P1Q8NGE3 313 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 RITA1Q96K30 269 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 PARD6GQ9BYG4 376 aaPredicted RBP16■□□□□ 0.15
COPS7A-218ENST00000543939 DPM3Q9P2X0 92 aa16■□□□□ 0.15
COPS7A-218ENST00000543939 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
COPS7A-218ENST00000543939 TEX50A0A1B0GTY4 177 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 A0A1W2PPI3 338 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 FOXH1O75593 365 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 SCAF4O95104 1147 aaKnown RBP15.99■□□□□ 0.15
COPS7A-218ENST00000543939 USF1P22415 310 aaPredicted RBP15.99■□□□□ 0.15
COPS7A-218ENST00000543939 RAB5CP51148 216 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 BLOC1S1P78537 153 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 PRCDQ00LT1 54 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 LRRC75BQ2VPJ9 315 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 PXDC1Q5TGL8 231 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 OR2G3Q8NGZ4 309 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 OR5B3Q8NH48 314 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 PINX1Q96BK5 328 aaKnown RBP15.99■□□□□ 0.15
COPS7A-218ENST00000543939 FAM210AQ96ND0 272 aa15.99■□□□□ 0.15
COPS7A-218ENST00000543939 POLR3KQ9Y2Y1 108 aaPredicted RBP15.99■□□□□ 0.15
COPS7A-218ENST00000543939 IFNA10P01566 189 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms