RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 OR4A5Q8NH83 315 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 LHFPL5Q8TAF8 219 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 SEC22CQ9BRL7 303 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 PRR13Q9NZ81 148 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 A0A0B4J2A0 478 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 FAM181BA6NEQ2 426 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 SNRPGP15A8MWD9 76 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 CRYGBP07316 175 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 FAM219AQ8IW50 185 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 TMEM140Q9NV12 185 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 SHPKQ9UHJ6 478 aa18.38■□□□□ 0.53
HOMER3-205ENST00000542541 VDAC1P21796 283 aa18.37■□□□□ 0.53
HOMER3-205ENST00000542541 SLC35G3Q8N808 338 aa18.37■□□□□ 0.53
HOMER3-205ENST00000542541 TMEM167AQ8TBQ9 72 aa18.37■□□□□ 0.53
HOMER3-205ENST00000542541 MMP24Q9Y5R2 645 aa18.37■□□□□ 0.53
HOMER3-205ENST00000542541 KBTBD11O94819 623 aa18.36■□□□□ 0.53
HOMER3-205ENST00000542541 AMY1AP04745 511 aa18.36■□□□□ 0.53
HOMER3-205ENST00000542541 TATDN3Q17R31 274 aa18.36■□□□□ 0.53
HOMER3-205ENST00000542541 C12orf45Q8N5I9 185 aaPredicted RBP18.36■□□□□ 0.53
HOMER3-205ENST00000542541 LSM10Q969L4 123 aaKnown RBP18.36■□□□□ 0.53
HOMER3-205ENST00000542541 PRSS22Q9GZN4 317 aa18.36■□□□□ 0.53
HOMER3-205ENST00000542541 SNAPC5O75971 98 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 IGKV1-5P01602 117 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 HLA-DRB1P01911 266 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 LYZL2Q7Z4W2 148 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 MMD2Q8IY49 270 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 RANBP3Q9H6Z4 567 aaPredicted RBP18.35■□□□□ 0.53
HOMER3-205ENST00000542541 TMED3Q9Y3Q3 217 aa18.35■□□□□ 0.53
HOMER3-205ENST00000542541 ACTL6BO94805 426 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 IL6RP08887 468 aaPredicted RBP18.34■□□□□ 0.53
HOMER3-205ENST00000542541 BLCAPP62952 87 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 PRSS8Q16651 343 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 CLCC1Q96S66 551 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 UPK2O00526 184 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 FGF2P09038 288 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 UXS1Q8NBZ7 420 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 TPSG1Q9NRR2 321 aa18.34■□□□□ 0.53
HOMER3-205ENST00000542541 FCN1O00602 326 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 IFNA21P01568 189 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 MAS1LP35410 378 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 RPL8P62917 257 aaKnown RBP18.33■□□□□ 0.52
HOMER3-205ENST00000542541 C9orf152Q5JTZ5 239 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 ZNF562Q6V9R5 426 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 OR4A16Q8NH70 328 aa18.33■□□□□ 0.52
HOMER3-205ENST00000542541 ZNF430Q9H8G1 570 aaPredicted RBP18.33■□□□□ 0.52
HOMER3-205ENST00000542541 C7orf66A4D0T2 115 aa18.32■□□□□ 0.52
HOMER3-205ENST00000542541 P0C879 139 aa18.32■□□□□ 0.52
HOMER3-205ENST00000542541 FKBP11Q9NYL4 201 aa18.32■□□□□ 0.52
HOMER3-205ENST00000542541 PRNDQ9UKY0 176 aa18.32■□□□□ 0.52
HOMER3-205ENST00000542541 KCNAB3O43448 404 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 RBMXL2O75526 392 aaKnown RBP18.31■□□□□ 0.52
HOMER3-205ENST00000542541 CNIH1O95406 144 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 CA2P00918 260 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 HOXB5P09067 269 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 CX3CL1P78423 397 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 PJVKQ0ZLH3 352 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 OR9G9P0C7N8 305 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 HLA-GP17693 338 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 RELBQ01201 579 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 TNXAQ16473 311 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 NMSQ5H8A3 153 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 GPR146Q96CH1 333 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 COMMD5Q9GZQ3 224 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 OR51J1Q9H342 316 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 ALG5Q9Y673 324 aa18.31■□□□□ 0.52
HOMER3-205ENST00000542541 TRAV3A0A0B4J244 114 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 SH2D7A6NKC9 451 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-205ENST00000542541 DBX1A6NMT0 343 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 TSPAN9O75954 239 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 IGHG2P01859 326 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 GNB1P62873 340 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 MRGPRG-AS1Q2M3A8 158 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 ARSJQ5FYB0 599 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-205ENST00000542541 GGNBP1Q5YKI7 109 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 SLC35E3Q7Z769 313 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-205ENST00000542541 CACFD1Q9UGQ2 172 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 JMJD1CQ15652 2540 aa18.3■□□□□ 0.52
HOMER3-205ENST00000542541 IGHV7-81A0A0B4J1V7 117 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 A0A0B4J293 547 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 A0A0G2JRQ6 117 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 A0A1B0GU03 582 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 SSNA1O43805 119 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 SULT1A3P0DMM9 295 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 SULT1A4P0DMN0 295 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 FXYD3Q14802 87 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 THOC7Q6I9Y2 204 aaKnown RBP18.29■□□□□ 0.52
HOMER3-205ENST00000542541 Q8N2B8 174 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 SPIN2AQ99865 258 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 SPIN2BQ9BPZ2 258 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 NSG2Q9Y328 171 aa18.29■□□□□ 0.52
HOMER3-205ENST00000542541 C15orf61A6NNL5 157 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 ADAP1O75689 374 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 SLC25A6P12236 298 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 IZUMO4Q1ZYL8 232 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 FOXRED2Q8IWF2 684 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 OR2T6Q8NHC8 308 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 HSPB9Q9BQS6 159 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 ZNF702PQ9H963 129 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 TMEM14BQ9NUH8 114 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms