RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CST1P01037 141 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 EIF4EP06730 217 aaKnown RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 HOXB6P17509 224 aaKnown RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 CEACAM6P40199 344 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 ALDH3B2P48448 385 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 AQP4P55087 323 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 RPS27AP62979 156 aaKnown RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 MRPL28Q13084 256 aaKnown RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 DDI2Q5TDH0 399 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 AADACL4Q5VUY2 407 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 THOC7Q6I9Y2 204 aaKnown RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 GSG1LQ6UXU4 331 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 OSR1Q8TAX0 266 aaPredicted RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 RFKQ969G6 155 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 PTX4Q96A99 478 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 OR14A2Q96R54 314 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
YBX3-211ENST00000541351 C11orf54Q9H0W9 315 aaPredicted RBP6.72□□□□□ -1.33
YBX3-211ENST00000541351 IGHV3-35A0A0C4DH35 117 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 A0A1W2PPQ1 181 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 OR4C45A6NMZ5 311 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 PDCD6O75340 191 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 OXTP01178 125 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 HTN3P15516 51 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 GNRHRP30968 328 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 NANOS3P60323 173 aaKnown RBP6.71□□□□□ -1.34
YBX3-211ENST00000541351 PLA2G7Q13093 441 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 OXA1LQ15070 435 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 CDK10Q15131 360 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 PQLC1Q8N2U9 271 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 OR5AK2Q8NH90 309 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 VSTM2AQ8TAG5 236 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 BSCL2Q96G97 398 aaPredicted RBP6.71□□□□□ -1.34
YBX3-211ENST00000541351 ADTRPQ96IZ2 230 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 IL4I1Q96RQ9 567 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 ATP6V0BQ99437 205 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 UQCC2Q9BRT2 126 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 NIPSNAP3BQ9BS92 247 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 RIMS4Q9H426 269 aaPredicted RBP6.71□□□□□ -1.34
YBX3-211ENST00000541351 CHMP1AQ9HD42 196 aaPredicted RBP6.71□□□□□ -1.34
YBX3-211ENST00000541351 PUS1Q9Y606 427 aaKnown RBP eCLIP6.71□□□□□ -1.34
YBX3-211ENST00000541351 S4R3C0 116 aa6.71□□□□□ -1.34
YBX3-211ENST00000541351 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 TRAV2A0A0B4J234 112 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 SMIM9A6NGZ8 99 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 SLC16A6O15403 523 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 CRYGCP07315 174 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 RPA2P15927 270 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 BDKRB2P30411 391 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 MAS1LP35410 378 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 BCAP31P51572 246 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 DEFB131AP59861 70 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 ERVFC1-1P60608 527 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 TMEM88Q6PEY1 159 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 CEACAM19Q7Z692 300 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 TMEM116Q8NCL8 245 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 FANCD2OSQ96PS1 177 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 NEDD4LQ96PU5 975 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 RNF2Q99496 336 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 SELENOIQ9C0D9 397 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 MAGT1Q9H0U3 335 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 ZNF430Q9H8G1 570 aaPredicted RBP6.7□□□□□ -1.34
YBX3-211ENST00000541351 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
YBX3-211ENST00000541351 SMPXQ9UHP9 88 aa6.7□□□□□ -1.34
YBX3-211ENST00000541351 IGKV3-7A0A075B6H7 116 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 DAPL1A0PJW8 107 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 BOLA2-SMG1P6H3BVE0 249 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 RAP2AP10114 183 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 VAMP1P23763 118 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.34
YBX3-211ENST00000541351 RPL27AP46776 148 aaKnown RBP6.69□□□□□ -1.34
YBX3-211ENST00000541351 SSX1Q16384 188 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 RNASE12Q5GAN4 147 aaKnown RBP6.69□□□□□ -1.34
YBX3-211ENST00000541351 LEMD1Q68G75 181 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 CYP2R1Q6VVX0 501 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 IDO2Q6ZQW0 420 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 SSX9Q7RTT3 188 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
YBX3-211ENST00000541351 DUSP18Q8NEJ0 188 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 SETD6Q8TBK2 473 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 IMPAD1Q9NX62 359 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 CKLFQ9UBR5 152 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 KLK9Q9UKQ9 250 aa6.69□□□□□ -1.34
YBX3-211ENST00000541351 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 MFSD2BA6NFX1 497 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 SRRM4A7MD48 611 aaKnown RBP6.68□□□□□ -1.34
YBX3-211ENST00000541351 J3QLW9 94 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 CRYZL1O95825 349 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 MGMTP16455 207 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 ZNF19P17023 458 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 FGF9P31371 208 aaPredicted RBP6.68□□□□□ -1.34
YBX3-211ENST00000541351 ZNF85Q03923 595 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 RELQ04864 619 aaPredicted RBP6.68□□□□□ -1.34
YBX3-211ENST00000541351 CLINT1Q14677 625 aa6.68□□□□□ -1.34
YBX3-211ENST00000541351 USF2Q15853 346 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms