RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TMEM170AQ8WVE7 144 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 FLYWCH2Q96CP2 140 aaKnown RBP4.46□□□□□ -1.7
SUDS3-202ENST00000541280 GINS4Q9BRT9 223 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 CABLES2Q9BTV7 478 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 MRPL20Q9BYC9 149 aaKnown RBP4.46□□□□□ -1.7
SUDS3-202ENST00000541280 OR51J1Q9H342 316 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 NECAP2Q9NVZ3 263 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 RDH8Q9NYR8 311 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 KCNK7Q9Y2U2 307 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 RRP15Q9Y3B9 282 aaKnown RBP4.46□□□□□ -1.7
SUDS3-202ENST00000541280 RBM7Q9Y580 266 aaKnown RBP4.46□□□□□ -1.7
SUDS3-202ENST00000541280 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
SUDS3-202ENST00000541280 ZNF736B4DX44 427 aaPredicted RBP4.45□□□□□ -1.7
SUDS3-202ENST00000541280 H0YJW9 148 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 H7C2Y5 167 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CREBL2O60519 120 aaPredicted RBP4.45□□□□□ -1.7
SUDS3-202ENST00000541280 GSTT2P0CG29 244 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 GSTT2BP0CG30 244 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 GNB3P16520 340 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CD36P16671 472 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 SDC2P34741 201 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CBX5P45973 191 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 OR3A3P47888 321 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CRIP2P52943 208 aaPredicted RBP4.45□□□□□ -1.7
SUDS3-202ENST00000541280 OR10A3P58181 314 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 GNG2P59768 71 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 GNMTQ14749 295 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 PLGLAQ15195 96 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 RTL8BQ17RB0 113 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 TMEM95Q3KNT9 176 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 SFXN4Q6P4A7 337 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CNIH2Q6PI25 160 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 TSPAN14Q8NG11 270 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 OR5M8Q8NGP6 311 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 BORCS5Q969J3 196 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 S100A16Q96FQ6 103 aaKnown RBP4.45□□□□□ -1.7
SUDS3-202ENST00000541280 UBE2E2Q96LR5 201 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 CMTM3Q96MX0 182 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
SUDS3-202ENST00000541280 DAPK2Q9UIK4 370 aa4.45□□□□□ -1.7
SUDS3-202ENST00000541280 IGHV7-81A0A0B4J1V7 117 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 TRAV41A0A0B4J266 112 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 IGKV1-6A0A0C4DH72 117 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 LOC100506127A0A0U1RQW1 187 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 HMX3A6NHT5 357 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 SH2D7A6NKC9 451 aaPredicted RBP4.44□□□□□ -1.7
SUDS3-202ENST00000541280 H3BUA1 57 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 CCL24O00175 119 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 BET1O15155 118 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 AIREO43918 545 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 RAMP3O60896 148 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 BRI3O95415 125 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 OR8U9P0C7N5 309 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 PSMB8P28062 276 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 RAB9AP51151 201 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 INSL3P51460 131 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 LUMP51884 338 aaPredicted RBP4.44□□□□□ -1.7
SUDS3-202ENST00000541280 ARPC4P59998 168 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 CX3CL1P78423 397 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 RUNX1Q01196 453 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 MSMO1Q15800 293 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 NEDD8Q15843 81 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 MOGAT2Q3SYC2 334 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 IDNKQ5T6J7 187 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 FAM53AQ6NSI3 398 aaPredicted RBP4.44□□□□□ -1.7
SUDS3-202ENST00000541280 MINDY2Q8NBR6 621 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 C4orf3Q8WVX3 66 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 RNF183Q96D59 192 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 ABHD14BQ96IU4 210 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 HDHD3Q9BSH5 251 aaPredicted RBP4.44□□□□□ -1.7
SUDS3-202ENST00000541280 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 OR51E2Q9H255 320 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 KCNK15Q9H427 330 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 SLA2Q9H6Q3 261 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 SLC35D1Q9NTN3 355 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 SDHAF2Q9NX18 166 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 RHBDL2Q9NX52 303 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 OR1A1Q9P1Q5 309 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 SPATA2Q9UM82 520 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 VSIG4Q9Y279 399 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 PRELID3BQ9Y3B1 194 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 NUBP2Q9Y5Y2 271 aa4.44□□□□□ -1.7
SUDS3-202ENST00000541280 A0A075B6Q4 140 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 A0A0G2JLM5 398 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 SMIM31A0A1B0GVY4 71 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 G3V4G9 280 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 M0R1X1 148 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 XRCC3O43542 346 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 TPPPO94811 219 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 HLA-DQB1P01920 261 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 OR8U8P0C7N1 319 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 SLC2A2P11168 524 aaPredicted RBP4.43□□□□□ -1.7
SUDS3-202ENST00000541280 PSG5Q15238 335 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 VMA21Q3ZAQ7 101 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 RPL39P5Q59GN2 51 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 IGSF11Q5DX21 431 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 FAM131AQ6UXB0 335 aa4.43□□□□□ -1.7
SUDS3-202ENST00000541280 PPP1R27Q86WC6 154 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms