RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 CLDN14O95500 239 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 UHRF2Q96PU4 802 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 OR2D2Q9H210 308 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 KNTC1P50748 2209 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 Q0VG73 95 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 SPRY4Q9C004 299 aa12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.39□□□□□ -0.43
AC005840.4-201ENST00000541242 A0A1W2PS18 150 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 C9orf172C9J069 976 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF83P51522 516 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 RPL31P62899 125 aaKnown RBP12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 OR10D3Q8NH80 312 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 NAT8BQ9UHF3 227 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 P0C879 139 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 LCN12Q6JVE5 192 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 Q6P435 159 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 ORAOV1Q8WV07 137 aa12.38□□□□□ -0.43
AC005840.4-201ENST00000541242 C15orf62A8K5M9 175 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 NPIPB11E5RHQ5 1161 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 CD1BP29016 333 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 KLF3P57682 345 aaPredicted RBP12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 HOXA4Q00056 320 aaPredicted RBP12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 SPINK14Q6IE38 97 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF253O75346 499 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 OR2H2O95918 312 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 SP9P0CG40 484 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 CDKN1BP46527 198 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 CEBPDP49716 269 aaPredicted RBP12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 GFRA1P56159 465 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 TCL1AP56279 114 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 HTD2P86397 168 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 UBE2V1Q13404 147 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 ASPHD1Q5U4P2 390 aa12.37□□□□□ -0.43
AC005840.4-201ENST00000541242 GJE1A6NN92 205 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 NTF3P20783 257 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 FXYD3Q14802 87 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 WDR83OSQ9Y284 106 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 DPRXA6NFQ7 191 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 M0QZ24 198 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 CYB561P49447 251 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF497Q6ZNH5 498 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 NIT1Q86X76 327 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 RNF24Q9Y225 148 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 COX11Q9Y6N1 276 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 DNAJC13O75165 2243 aa12.36□□□□□ -0.43
AC005840.4-201ENST00000541242 FOXH1O75593 365 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 GDF1P27539 372 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 TSPOP30536 169 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 HES7Q9BYE0 225 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 V9GYV3 84 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 MED13Q9UHV7 2174 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 DNPH1O43598 174 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 CD59P13987 128 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 SRIP30626 198 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF645Q8N7E2 425 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 RAB1CQ92928 201 aa12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 RNASE7Q9H1E1 156 aaKnown RBP12.35□□□□□ -0.43
AC005840.4-201ENST00000541242 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 NEURL1O76050 574 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF718Q3SXZ3 478 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 RIPPLY2Q5TAB7 128 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 LINC00596Q86U02 117 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 DOLPP1Q86YN1 238 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 ZPBPQ9BS86 351 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 PTPRBP23467 1997 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 TFF1P04155 84 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 CELA3AP09093 270 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 TREML4Q6UXN2 200 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 MGST2Q99735 147 aa12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
AC005840.4-201ENST00000541242 LINC00473A8K010 186 aa12.33□□□□□ -0.44
AC005840.4-201ENST00000541242 CDX4O14627 284 aaPredicted RBP12.33□□□□□ -0.44
AC005840.4-201ENST00000541242 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
AC005840.4-201ENST00000541242 TOMM40O96008 361 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms