RNA–Protein interactions for RNA: ENST00000540945.1

DNAJC4-208, Transcript of DnaJ heat shock protein family (Hsp40) member C4, human

TSL 2

Gene DNAJC4, Length 703 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNAJC4-208	ENST00000540945	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.63	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DMRT1	Q9Y5R6	373 aa		13.63	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SELENOK	Q9Y6D0	94 aa		13.63	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TRBV6-7	A0A0A0MS04	114 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945		A0A0J9YWU9	116 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945		H3BMQ9	156 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SLC17A2	O00624	439 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	NDUFB8	O95169	186 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DUT	P33316	252 aa	Known RBP	13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TGFBR1	P36897	503 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	ANKRD55	Q3KP44	614 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	PLAC9	Q5JTB6	97 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SLC25A42	Q86VD7	318 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	GPHB5	Q86YW7	130 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	OR56B1	Q8NGI3	324 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	ZNF257	Q9Y2Q1	563 aa		13.62	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DIRAS3	O95661	229 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	GSTT2	P0CG29	244 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	GSTT2B	P0CG30	244 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	RAB3B	P20337	219 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SDC2	P34741	201 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	PSMD7	P51665	324 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	CDK10	Q15131	360 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	RAB11B	Q15907	218 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	C10orf55	Q5SWW7	151 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	MMD2	Q8IY49	270 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	RPP25L	Q8N5L8	163 aa	Known RBP	13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DGCR14	Q96DF8	476 aa	Known RBP	13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	FBXL7	Q9UJT9	491 aa		13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	KLK5	Q9Y337	293 aa	Predicted RBP	13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	AK6	Q9Y3D8	172 aa	Known RBP	13.61	□□□□□ -0.23
DNAJC4-208	ENST00000540945	ZNF320	A2RRD8	509 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SCAF4	O95104	1147 aa	Known RBP	13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	FCGR3A	P08637	254 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SAA1	P0DJI8	122 aa	Predicted RBP	13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	ARL3	P36405	182 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TNFRSF9	Q07011	255 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	FAM106A	Q4KMX7	169 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	LYG2	Q86SG7	212 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	WFDC3	Q8IUB2	231 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	GFI1	Q99684	422 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	GINS4	Q9BRT9	223 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DCSTAMP	Q9H295	470 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	MLX	Q9UH92	298 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945		V9GY05	133 aa		13.6	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TMEM213	A2RRL7	107 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	LINC00473	A8K010	186 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	IGHV3-23	P01764	117 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	CLEC2L	P0C7M8	214 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	BMI1	P35226	326 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	MXD1	Q05195	221 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	SPCS2	Q15005	226 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TM4SF20	Q53R12	229 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	UXS1	Q8NBZ7	420 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	DCUN1D5	Q9BTE7	237 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	TP53TG1	Q9Y2A0	90 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	KCNK7	Q9Y2U2	307 aa		13.59	□□□□□ -0.23
DNAJC4-208	ENST00000540945	HMX3	A6NHT5	357 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	NOTO	A8MTQ0	251 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945		A8MWP6	167 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	SPRY2	O43597	315 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	RPS19	P39019	145 aa	Known RBP	13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	CLDN12	P56749	244 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	OR10A3	P58181	314 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	OR4A47	Q6IF82	309 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	CLEC19A	Q6UXS0	136 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	FAM3D	Q96BQ1	224 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	RAB3C	Q96E17	227 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	CCDC140	Q96MF4	163 aa		13.58	□□□□□ -0.24
DNAJC4-208	ENST00000540945	NPIPB5	A8MRT5	1133 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	FCGR3B	O75015	233 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	TMEM127	O75204	238 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	RANBP1	P43487	201 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	APOC4	P55056	127 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	C2orf76	Q3KRA6	126 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	BTNL8	Q6UX41	500 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945		Q6ZWC4	215 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	NR2C2AP	Q86WQ0	139 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	CROCCP3	Q8IVE0	287 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	MAFIP	Q8WZ33	124 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	SLC25A46	Q96AG3	418 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945		S4R3C0	116 aa		13.57	□□□□□ -0.24
DNAJC4-208	ENST00000540945	TRAV25	A0A0B4J276	109 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	SMIM30	A4D0T7	59 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	IFITM5	A6NNB3	132 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	TEX22	C9J3V5	150 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	ATF4	P18848	351 aa	Predicted RBP	13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	DEFB135	Q30KP9	77 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	SFXN4	Q6P4A7	337 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	C19orf35	Q6ZS72	473 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	OR1L6	Q8NGR2	347 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	EEF1AKMT3	Q96AZ1	226 aa		13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	FYTTD1	Q96QD9	318 aa	Known RBP	13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	MRPS7	Q9Y2R9	242 aa	Known RBP	13.56	□□□□□ -0.24
DNAJC4-208	ENST00000540945	TMEM272	A0A1B0GTI8	110 aa		13.55	□□□□□ -0.24
DNAJC4-208	ENST00000540945	DEDD	O75618	318 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms