RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 IL6RP08887 468 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 OR9G9P0C7N8 305 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 RRAS2P62070 204 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 FCN2Q15485 313 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 Q6ZRM9 215 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 H2BFWTQ7Z2G1 175 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 OR8H1Q8NGG4 311 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 RBM14Q96PK6 669 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 SLC25A33Q9BSK2 321 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 METTL1Q9UBP6 276 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 TRAV3A0A0B4J244 114 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 NCBP2LA6PVI3 153 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 GOSR2O14653 212 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 OR2F2O95006 317 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 OR2A4O95047 310 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 SPDEFO95238 335 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 IFNA21P01568 189 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 HLA-GP17693 338 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 RBMS3Q6XE24 437 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 FAM219AQ8IW50 185 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 Q8N9W7 124 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 TEX45Q8NA69 505 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 OR2A7Q96R45 310 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 BET1LQ9NYM9 111 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 MGAT4CQ9UBM8 478 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 PITPNC1Q9UKF7 332 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 NSG2Q9Y328 171 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 SIGLEC9Q9Y336 463 aa15.07■□□□□ 0
TNFRSF1A-213ENST00000540022 BTBD17A6NE02 478 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 SIX6O95475 246 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 SULT1A3P0DMM9 295 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 SULT1A4P0DMN0 295 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 CXCL3P19876 107 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 MRGPRG-AS1Q2M3A8 158 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 OR11H7Q8NGC8 314 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 VSTM2AQ8TAG5 236 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 TMEM167AQ8TBQ9 72 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 OR10C1Q96KK4 312 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 DUX5Q96PT3 197 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 C1RLQ9NZP8 487 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 KIAA1456Q9P272 454 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 VPREB3Q9UKI3 123 aa15.06■□□□□ 0
TNFRSF1A-213ENST00000540022 UPK2O00526 184 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 CHST1O43916 411 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 KBTBD11O94819 623 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 SRSF2Q01130 221 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 RELBQ01201 579 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 PJVKQ0ZLH3 352 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 C5orf64Q2M2E5 130 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 FAM71E2Q8N5Q1 922 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 OR5M8Q8NGP6 311 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 CACNG5Q9UF02 275 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 POMT1Q9Y6A1 747 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 STAB1Q9NY15 2570 aa15.05■□□□□ -0
TNFRSF1A-213ENST00000540022 C13orf42A0A1B0GVH6 325 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 FAM25EA8MYX2 175 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 PLGLAQ15195 96 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 CLCC1Q96S66 551 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 CHIAQ9BZP6 476 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 RANBP3Q9H6Z4 567 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 ESM1Q9NQ30 184 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 MOB4Q9Y3A3 225 aa15.04■□□□□ -0
TNFRSF1A-213ENST00000540022 C5orf51A6NDU8 294 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 DNAJC9-AS1A6NH13 148 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 FCN1O00602 326 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 AMY1AP04745 511 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 H2BFSP57053 126 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 OR2B8PP59922 312 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 GSG1LQ6UXU4 331 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 PPP1R27Q86WC6 154 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 TMEM86BQ8N661 226 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 C5orf56Q8N8D9 126 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 OR4A5Q8NH83 315 aa15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 ZNF418Q8TF45 676 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 ZNF430Q9H8G1 570 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-213ENST00000540022 A0A1B0GU03 582 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 HMX3A6NHT5 357 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 FGF16O43320 207 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 SLC25A6P12236 298 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 MYOD1P15172 320 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 SMCO1Q147U7 214 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 PRSS8Q16651 343 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 IAH1Q2TAA2 248 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 C16orf82Q7Z2V1 217 aa15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 WDR89Q96FK6 387 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-213ENST00000540022 PITX3O75364 302 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SNAPC5O75971 98 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 BCAP31P51572 246 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 RPL8P62917 257 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 THOC7Q6I9Y2 204 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ZBTB8BQ8NAP8 495 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OR4A16Q8NH70 328 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SPATA3Q8NHX4 192 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CHAC2Q8WUX2 184 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 C2orf50Q96LR7 162 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SPIN2AQ99865 258 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 RASL11BQ9BPW5 248 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SPIN2BQ9BPZ2 258 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 COA4Q9NYJ1 87 aa15.02□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SH2D7A6NKC9 451 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms