RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 LGALS7P47929 136 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 OR2B8PP59922 312 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 RAB2AP61019 212 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 RAB11AP62491 216 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 HLA-DRB5Q30154 266 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 KIR3DL3Q8N743 410 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 OR4C12Q96R67 309 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 SH3BGRL3Q9H299 93 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 HEYLQ9NQ87 328 aaPredicted RBP13.98□□□□□ -0.17
LTBR-207ENST00000539925 UQCC1Q9NVA1 299 aa13.98□□□□□ -0.17
LTBR-207ENST00000539925 OVOL3O00110 214 aa13.97□□□□□ -0.17
LTBR-207ENST00000539925 IGLV1-47P01700 117 aa13.97□□□□□ -0.17
LTBR-207ENST00000539925 USF1P22415 310 aaPredicted RBP13.97□□□□□ -0.17
LTBR-207ENST00000539925 VDAC2P45880 294 aaPredicted RBP13.97□□□□□ -0.17
LTBR-207ENST00000539925 HOXA1P49639 335 aaPredicted RBP13.97□□□□□ -0.17
LTBR-207ENST00000539925 TMEM182Q6ZP80 229 aaPredicted RBP13.97□□□□□ -0.17
LTBR-207ENST00000539925 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
LTBR-207ENST00000539925 HARBI1Q96MB7 349 aa13.97□□□□□ -0.17
LTBR-207ENST00000539925 WDR61Q9GZS3 305 aaKnown RBP13.97□□□□□ -0.17
LTBR-207ENST00000539925 ITPR1Q14643 2758 aa13.97□□□□□ -0.17
LTBR-207ENST00000539925 MALRD1Q5VYJ5 2156 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 KBTBD11O94819 623 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 HBE1P02100 147 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 VWC2Q2TAL6 325 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 OR8G2PQ6IF36 304 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 VKORC1L1Q8N0U8 176 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 PLA2G2EQ9NZK7 142 aa13.96□□□□□ -0.17
LTBR-207ENST00000539925 PMS2P5A8MQ11 134 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 IFNA10P01566 189 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 ZNF616Q08AN1 781 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 ARL16Q0P5N6 197 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 VMA21Q3ZAQ7 101 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 CENPVQ7Z7K6 275 aaPredicted RBP13.95□□□□□ -0.18
LTBR-207ENST00000539925 THNSL2Q86YJ6 484 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 TAF15Q92804 592 aaKnown RBP eCLIP13.95□□□□□ -0.18
LTBR-207ENST00000539925 PBDC1Q9BVG4 233 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 OR51B2Q9Y5P1 312 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 C15orf62A8K5M9 175 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 BUB1B-PAK6H3BSN5 160 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 MPDU1O75352 247 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 LY6HO94772 140 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 MBP02144 154 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 IGKV1-16P04430 117 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 CDKN1AP38936 164 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 PRCDQ00LT1 54 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 FAM213BQ8TBF2 198 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 TMEM167AQ8TBQ9 72 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 RNF5Q99942 180 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 MS4A7Q9GZW8 240 aaPredicted RBP13.95□□□□□ -0.18
LTBR-207ENST00000539925 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 ONECUT1Q9UBC0 465 aa13.95□□□□□ -0.18
LTBR-207ENST00000539925 DOCK11Q5JSL3 2073 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 CACNA1BQ00975 2339 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 C22orf46C9J442 243 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 ENSAO43768 121 aaKnown RBP13.94□□□□□ -0.18
LTBR-207ENST00000539925 SAA1P0DJI8 122 aaPredicted RBP13.94□□□□□ -0.18
LTBR-207ENST00000539925 CEACAM3P40198 252 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 RPS16P62249 146 aaKnown RBP13.94□□□□□ -0.18
LTBR-207ENST00000539925 DLK1P80370 383 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 MRPL41Q8IXM3 137 aaKnown RBP13.94□□□□□ -0.18
LTBR-207ENST00000539925 OR11H6Q8NGC7 330 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 ZNRD1Q9P1U0 126 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 FBXO7Q9Y3I1 522 aa13.94□□□□□ -0.18
LTBR-207ENST00000539925 FNDC10F2Z333 226 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 C17orf112F2Z3M2 114 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 PRTN3P24158 256 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 DVL1P1P54792 670 aaPredicted RBP13.93□□□□□ -0.18
LTBR-207ENST00000539925 ZNF709Q8N972 641 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 RPEQ96AT9 228 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 NARS2Q96I59 477 aaKnown RBP13.93□□□□□ -0.18
LTBR-207ENST00000539925 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
LTBR-207ENST00000539925 KPTNQ9Y664 436 aa13.93□□□□□ -0.18
LTBR-207ENST00000539925 TRAV3A0A0B4J244 114 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 A0A1B0GW64 132 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 A0A1W2PN81 502 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 TMEM218A2RU14 115 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 CHRNA7P36544 502 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 PDLIM4P50479 330 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 RPL8P62917 257 aaKnown RBP13.92□□□□□ -0.18
LTBR-207ENST00000539925 PEA15Q15121 130 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 ETV3LQ6ZN32 361 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 BPIFCQ8NFQ6 507 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 LINC00052Q96N35 136 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 COMMD5Q9GZQ3 224 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 KCNIP2Q9NS61 270 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
LTBR-207ENST00000539925 TRAV1-1A0A0B4J248 108 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 UBE2L5PA0A1B0GUS4 154 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
LTBR-207ENST00000539925 H2AFB1P0C5Y9 115 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 NPY1RP25929 384 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 SNCAP37840 140 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 REG1BP48304 166 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 RUNX1Q01196 453 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 TEX45Q8NA69 505 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms