RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PSMG3Q9BT73 122 aaPredicted RBP5.53□□□□□ -1.52
LSAMP-207ENST00000539563 AURKAIP1Q9NWT8 199 aaPredicted RBP5.53□□□□□ -1.52
LSAMP-207ENST00000539563 TCF19Q9Y242 345 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 RECKO95980 971 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 AGAP20933 346 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM177Q53S58 311 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 DUX5Q96PT3 197 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 HSPB9Q9BQS6 159 aa5.53□□□□□ -1.52
LSAMP-207ENST00000539563 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
LSAMP-207ENST00000539563 HELZP42694 1942 aaKnown RBP5.53□□□□□ -1.52
LSAMP-207ENST00000539563 ZG16O60844 167 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 FOLR2P14207 255 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TFPI2P48307 235 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 FXYD3Q14802 87 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TGIF1Q15583 401 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SAPCD1Q5SSQ6 148 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF502Q8TBZ5 544 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 GDF15Q99988 308 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SSBP3Q9BWW4 388 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 PLSCR2Q9NRY7 297 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 RAXQ9Y2V3 346 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TIAF1O95411 115 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TCTAP57738 103 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 C12orf54Q6X4T0 127 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 POC1AQ8NBT0 407 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TP53RKQ96S44 253 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 NMBP08949 121 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 IFITM3Q01628 133 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 EGR4Q05215 589 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SRSF12Q8WXF0 261 aaKnown RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SFRP2Q96HF1 295 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 DCTN5Q9BTE1 182 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 CHCHD2Q9Y6H1 151 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 LEPROTL1O95214 131 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 GLIPR1P48060 266 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 JOSD1Q15040 202 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 ACSF3Q4G176 576 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF818PQ6ZRF7 136 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TMEM74BQ9NUR3 256 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 LNP1A1A4G5 178 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 GDF9O60383 454 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 PPP1R17O96001 155 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 RND3P61587 244 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 CLDND2Q8NHS1 167 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 SIGLEC12Q96PQ1 595 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF703Q9H7S9 590 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 PHF3Q92576 2039 aaKnown RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 CD8AP01732 235 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 GPX1P07203 203 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 GATAD1Q8WUU5 269 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 NABP2Q9BQ15 211 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 CHODLQ9H9P2 273 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 BRWD1Q9NSI6 2320 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 TRGC2P03986 189 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-207ENST00000539563 HIST1H2BAQ96A08 127 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 FOXJ2Q9P0K8 574 aa5.52□□□□□ -1.53
LSAMP-207ENST00000539563 PLXND1Q9Y4D7 1925 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 CTSBP07858 339 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 DLX6P56179 175 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 OR4B1Q8NGF8 309 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 C1QTNF5Q9BXJ0 243 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 IL17BQ9UHF5 180 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 NPFFO15130 113 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 THY1P04216 161 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 REG1AP05451 166 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 MEF2CQ06413 473 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 FAM159AQ6UWV7 190 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 RNASEH2CQ8TDP1 164 aaKnown RBP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 TMEM106BQ9NUM4 274 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 FRMPD3Q5JV73 1810 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 RP1L1Q8IWN7 2480 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 CACNA1DQ01668 2161 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 A0A0G2JLM5 398 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 FAM181BA6NEQ2 426 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 PAPPA-AS1Q5QFB9 102 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 FAM57AQ8TBR7 257 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 TICRRQ7Z2Z1 1910 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 ZIC3O60481 467 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 LINC00305Q7Z4B0 112 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 APCDD1LQ8NCL9 501 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 GPR82Q96P67 336 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 ANAPC1Q9H1A4 1944 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 MPDZO75970 2070 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 IQCF6A8MYZ5 107 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 CRYBB3P26998 211 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 SMUG1Q53HV7 270 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 PNKDQ8N490 385 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 LEAP2Q969E1 77 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 GPX4P36969 197 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 NUP37Q8NFH4 326 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 PARLQ9H300 379 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 CACNA1IQ9P0X4 2223 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 RBFOX2O43251 390 aaKnown RBP eCLIP5.51□□□□□ -1.53
LSAMP-207ENST00000539563 KLF4O43474 513 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms