RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
RPAIN-206ENST00000539417 HPRT1P00492 218 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 IGKV1-39P01597 117 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 OPN1MWP04001 364 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 IGKV1D-39P04432 117 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 ELANEP08246 267 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.44
RPAIN-206ENST00000539417 OPN1MW2P0DN77 364 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 OPN1MW3P0DN78 364 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 MEF2DQ14814 521 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 BAK1Q16611 211 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 OR4A47Q6IF82 309 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 LPCAT3Q6P1A2 487 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 ETV3LQ6ZN32 361 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 C8orf86Q6ZUL3 223 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 COMMD1Q8N668 190 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 OR5T1Q8NG75 326 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 GON7Q9BXV9 100 aa12.27□□□□□ -0.44
RPAIN-206ENST00000539417 MSGN1A6NI15 193 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 PF4V1P10720 104 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 PIGPP57054 158 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 DEFA5Q01523 94 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 DEFB136Q30KP8 78 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 AKIRIN2Q53H80 203 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 SPANXN2Q5MJ10 180 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 SRSF12Q8WXF0 261 aaKnown RBP12.27□□□□□ -0.45
RPAIN-206ENST00000539417 BORCS5Q969J3 196 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 RTBDNQ9BSG5 229 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-206ENST00000539417 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 PLEKHA2Q9HB19 425 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 HRASLSQ9HDD0 168 aa12.27□□□□□ -0.45
RPAIN-206ENST00000539417 FOXA2Q9Y261 457 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-206ENST00000539417 HMX3A6NHT5 357 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 DISC1C4P0D8 188 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 MPPED1O15442 326 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 HRASP01112 189 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 PTBP1P26599 531 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPAIN-206ENST00000539417 G6PCP35575 357 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 RAB9AP51151 201 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 TAS2R31P59538 309 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 RND3P61587 244 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 CXorf66Q5JRM2 361 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-206ENST00000539417 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 MMD2Q8IY49 270 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 KLHL30-AS1Q8NEE0 82 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 TP53RKQ96S44 253 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
RPAIN-206ENST00000539417 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
RPAIN-206ENST00000539417 NQO2P16083 231 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
RPAIN-206ENST00000539417 SP6Q3SY56 376 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 LINC00299Q6ZSB3 139 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 POC5Q8NA72 575 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 ZFP57Q9NU63 452 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 BET1LQ9NYM9 111 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
RPAIN-206ENST00000539417 NUDT19A8MXV4 375 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 UPK2O00526 184 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 KRASP01116 189 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 CTSDP07339 412 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-206ENST00000539417 OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-206ENST00000539417 TMEM267Q0VDI3 215 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-206ENST00000539417 ZNF695Q8IW36 515 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 TOMM5Q8N4H5 51 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 DMBX1Q8NFW5 382 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 OR4F17Q8NGA8 305 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-206ENST00000539417 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 ALX4Q9H161 411 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-206ENST00000539417 MCUBQ9NWR8 336 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 SLC2A8Q9NY64 477 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 COMMD9Q9P000 198 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
RPAIN-206ENST00000539417 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 DNAH3Q8TD57 4116 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 MARCH11A6NNE9 402 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 PRH1P02810 166 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 TCTEX1D1Q8N7M0 179 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 ADAD2Q8NCV1 583 aaKnown RBP12.23□□□□□ -0.45
RPAIN-206ENST00000539417 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 PHB2Q99623 299 aa12.23□□□□□ -0.45
RPAIN-206ENST00000539417 AREGP15514 252 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 HLA-GP17693 338 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 RPL27AP46776 148 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms