RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 H0YJX3 145 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 M0R036 132 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CHP2O43745 196 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PDCD6O75340 191 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PIAS1O75925 651 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 GCGP01275 180 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IFNA16P05015 189 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 UCHL1P09936 223 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CD40LGP29965 261 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R31P59538 309 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R46P59540 309 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RAB14P61106 215 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RPL23P62829 140 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TFAMQ00059 246 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IFITM2Q01629 132 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 KRR1Q13601 381 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 UMODL1-AS1Q8N2C9 162 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR52L1Q8NGH7 329 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR5W2Q8NH69 310 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RXFP4Q8TDU9 374 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 AP3S1Q92572 193 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RMND5BQ96G75 393 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 FMC1Q96HJ9 113 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MED10Q9BTT4 135 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CDCA4Q9BXL8 241 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SLC19A3Q9BZV2 496 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MS4A6AQ9H2W1 248 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MED9Q9NWA0 146 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SPANXCQ9NY87 97 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ANXA10Q9UJ72 324 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 A2ML1A8K2U0 1454 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 DOCK10Q96BY6 2186 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PLXNA1Q9UIW2 1896 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IGHV1-45A0A0A0MS14 117 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV1-6A0A0C4DH72 117 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PQLC2LA1A4F0 135 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CEACAM18A8MTB9 384 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C4orf51C9J302 202 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 KCNK1O00180 336 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RBFOX2O43251 390 aaKnown RBP eCLIP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR2A4O95047 310 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SLC25A27O95847 323 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 DHFRP00374 187 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IGHV3-53P01767 116 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 APCSP02743 223 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C1QAP02745 245 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CRABP1P29762 137 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PSME3P61289 254 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RHOAP61586 193 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TPM4P67936 248 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TNFAIP6P98066 277 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SKP2Q13309 424 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RAB31Q13636 194 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM97Q5BJF2 176 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 HES3Q5TGS1 186 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C5orf46Q6UWT4 87 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR2Z1Q8NG97 314 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 LINC01560Q8TB33 94 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PIGXQ8TBF5 258 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SLC35G5Q96KT7 338 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 YPEL4Q96NS1 127 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR2A7Q96R45 310 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TAPBPLQ9BX59 468 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RSPO3Q9BXY4 272 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MS4A8Q9BY19 250 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR51E2Q9H255 320 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C8orf4Q9NR00 106 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ARMC1Q9NVT9 282 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C3orf18Q9UK00 162 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 FBXO5Q9UKT4 447 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 KIF15Q9NS87 1388 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MYOM3Q5VTT5 1437 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PHRF1Q9P1Y6 1649 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 DSCAMO60469 2012 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IGLV3-16A0A075B6K0 115 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 H0Y980 276 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DFFAO00273 331 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 GABARAPO95166 117 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CDS2O95674 445 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PRB2P02812 416 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IL3P08700 152 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 HRES1P13985 223 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 RPS3P23396 243 aaKnown RBP eCLIP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DNAJB13P59910 316 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DAD1P61803 113 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 RPS24P62847 133 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FLOT2Q14254 428 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 GUK1Q16774 197 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IAH1Q2TAA2 248 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MPV17L2Q567V2 206 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF550Q7Z398 422 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CRLF3Q8IUI8 442 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM35BQ8NCS4 154 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM161BQ8NDZ6 487 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 OR8J3Q8NGG0 315 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 NEK7Q8TDX7 302 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 C22orf15Q8WYQ4 148 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PDXPQ96GD0 296 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms