RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 ACTL6BO94805 426 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 LY86O95711 162 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 IFNA17P01571 189 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 P0C879 139 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 MMDQ15546 238 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 LRRC75BQ2VPJ9 315 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 C11orf87Q6NUJ2 197 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 PRSS54Q6PEW0 395 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 OR8H1Q8NGG4 311 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 ENY2Q9NPA8 101 aa12.4□□□□□ -0.42
VAMP1-207ENST00000539047 C2CD3Q4AC94 2353 aa12.4□□□□□ -0.43
VAMP1-207ENST00000539047 C15orf61A6NNL5 157 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 UPK2O00526 184 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 NBR2O15453 112 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 SLC25A17O43808 307 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 GPR137BO60478 399 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 NXPH3O95157 252 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 FGF2P09038 288 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 C4BPBP20851 252 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 DYNLT3P51808 116 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 OR2B8PP59922 312 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 MRPL41Q8IXM3 137 aaKnown RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 DCUN1D4Q92564 292 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 WDR89Q96FK6 387 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-207ENST00000539047 ZFHX3Q15911 3703 aa12.39□□□□□ -0.43
VAMP1-207ENST00000539047 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 E5RGE8 158 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 K7EPK0 472 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 SSSCA1O60232 199 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 PITX3O75364 302 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 DEDDO75618 318 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 AVPP01185 164 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 SLC25A4P12235 298 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 TNFRSF9Q07011 255 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 HNF4GQ14541 408 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 PSG5Q15238 335 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 TMEM167AQ8TBQ9 72 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 MEGF9Q9H1U4 602 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 ZC4H2Q9NQZ6 224 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 YAE1D1Q9NRH1 226 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
VAMP1-207ENST00000539047 MED13LQ71F56 2210 aa12.38□□□□□ -0.43
VAMP1-207ENST00000539047 RRHO14718 337 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 SYNGR2O43760 224 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 MAS1LP35410 378 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 HOXA1P49639 335 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-207ENST00000539047 SPCS3P61009 180 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
VAMP1-207ENST00000539047 RELBQ01201 579 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 IL15RAQ13261 267 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 EBI3Q14213 229 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 AANATQ16613 207 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 Q6ZRM9 215 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 ZNF257Q9Y2Q1 563 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 OR51B2Q9Y5P1 312 aa12.37□□□□□ -0.43
VAMP1-207ENST00000539047 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 ARPC5O15511 151 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 FSHBP01225 129 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 IGLV2-23P01705 113 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 F2RL1P55085 397 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 ID3Q02535 119 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms