RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 FOXA2Q9Y261 457 aaPredicted RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PPIAL4EA0A075B759 164 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 C1orf196B1AJZ1 125 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 SHISA9B4DS77 424 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PRSS46E5RG02 174 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PPIAL4DF5H284 164 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 SOX15O60248 233 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 OR2C1O95371 312 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 FAM87AP0C7U9 286 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PPIAL4FP0DN26 164 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 AGAP20933 346 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 MALSU1Q96EH3 234 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PIEZO2Q9H5I5 2752 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 PPIAL4AQ9Y536 164 aa9.37□□□□□ -0.91
SLC28A1-204ENST00000538177 NBEAQ8NFP9 2946 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 RRHO14718 337 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 MPDU1O75352 247 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 FCN3O75636 299 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 HRASP01112 189 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 GNG10P50151 68 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 RPL31P62899 125 aaKnown RBP9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 NCMAPQ5T1S8 102 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 DMRTC2Q8IXT2 367 aaPredicted RBP9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM170AQ8WVE7 144 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 GAL3ST2Q9H3Q3 398 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 B4DEV8 164 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 E7EQL1 145 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 CT45A6P0DMU7 189 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 CT45A5P0DMU8 189 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 CT45A7P0DMV0 189 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 PLA2G5P39877 138 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 HEPN1Q6WQI6 88 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 RAB24Q969Q5 203 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 SIRT7Q9NRC8 400 aa9.36□□□□□ -0.91
SLC28A1-204ENST00000538177 DMXL2Q8TDJ6 3036 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 ATMQ13315 3056 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 SEC14L6B5MCN3 397 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 CYB5BO43169 146 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 EIF3GO75821 320 aaKnown RBP eCLIP9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 HOXA1P49639 335 aaPredicted RBP9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 CD81P60033 236 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM200BQ69YZ2 307 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 ABHD12Q8N2K0 398 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 C2CD4CQ8TF44 421 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
SLC28A1-204ENST00000538177 CEP295Q9C0D2 2601 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 hCG_1809904A0A1W2PP81 198 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A1W2PR64 198 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 A0A1W2PRV1 198 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 RTL8BQ17RB0 113 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 TMEM249Q2WGJ8 235 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 TREML4Q6UXN2 200 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF833PQ6ZTB9 187 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 CCL17Q92583 94 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF714Q96N38 554 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 SDF2L1Q9HCN8 221 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 SLC35D1Q9NTN3 355 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 PRNDQ9UKY0 176 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 YLPM1P49750 1951 aaKnown RBP9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 TLN1Q9Y490 2541 aaKnown RBP9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 UPK2O00526 184 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 OPRK1P41145 380 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 PSMB3P49720 205 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 WDR25Q64LD2 544 aaPredicted RBP9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 OR13D1Q8NGV5 346 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 POLEQ07864 2286 aa9.34□□□□□ -0.91
SLC28A1-204ENST00000538177 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 TMEM250H0YL14 139 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 NDUFB3O43676 98 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 IFNA4P05014 189 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 CCL3L1P16619 93 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 CDC34P49427 236 aaPredicted RBP9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 ERVFRD-1P60508 538 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 EFNB3Q15768 340 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 LYPD2Q6UXB3 125 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
SLC28A1-204ENST00000538177 RAB1CQ92928 201 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms