RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 C2orf70A6NJV1 201 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 NPIPB5A8MRT5 1133 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 GGCTO75223 188 aaKnown RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 SLC22A5O76082 557 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 TPPPO94811 219 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 FOLR2P14207 255 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 MYOD1P15172 320 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 CD36P16671 472 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 GALP22466 123 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 RPL27AP46776 148 aaKnown RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 GUCA2BQ16661 112 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 LAX1Q8IWV1 398 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 MFSD4AQ8N468 514 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 TMEM167AQ8TBQ9 72 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 TCTEX1D2Q8WW35 142 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 WDR89Q96FK6 387 aaPredicted RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 FYTTD1Q96QD9 318 aaKnown RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 OR2A7Q96R45 310 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 SLC2A9Q9NRM0 540 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 TXNL4BQ9NX01 149 aaKnown RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 SLC2A8Q9NY64 477 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 TAS2R8Q9NYW2 309 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 DAPK2Q9UIK4 370 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 BLOC1S6Q9UL45 172 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 SPATA2Q9UM82 520 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 ZNF257Q9Y2Q1 563 aa6.37□□□□□ -1.39
USP28-203ENST00000537490 MRPS7Q9Y2R9 242 aaKnown RBP6.37□□□□□ -1.39
USP28-203ENST00000537490 CGB1A6NKQ9 187 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 OR11H12B2RN74 326 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 LGALS9O00182 355 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 KBTBD11O94819 623 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 CRYGCP07315 174 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 ZNF735P0CB33 412 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 PTHLHP12272 177 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 AREGP15514 252 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 FGF9P31371 208 aaPredicted RBP6.36□□□□□ -1.39
USP28-203ENST00000537490 HSPA13P48723 471 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 GNG2P59768 71 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 UBE2UQ5VVX9 321 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 ZNF66Q6ZN08 573 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 SSX9Q7RTT3 188 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 GPHB5Q86YW7 130 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 SPARTQ8N0X7 666 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 OR4S2Q8NH73 311 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 LGALS14Q8TCE9 139 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 CACNG8Q8WXS5 425 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 HSD17B10Q99714 261 aaKnown RBP6.36□□□□□ -1.39
USP28-203ENST00000537490 VCX3BQ9H321 246 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 SRD5A3Q9H8P0 318 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 ZC4H2Q9NQZ6 224 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 CCL28Q9NRJ3 127 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 ANXA10Q9UJ72 324 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 RRP15Q9Y3B9 282 aaKnown RBP6.36□□□□□ -1.39
USP28-203ENST00000537490 RYR2Q92736 4967 aa6.36□□□□□ -1.39
USP28-203ENST00000537490 DPPA5A6NC42 116 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 TNFSF12O43508 249 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 MRPS14O60783 128 aaKnown RBP6.35□□□□□ -1.39
USP28-203ENST00000537490 REG1AP05451 166 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 CLEC2LP0C7M8 214 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 CTRB1P17538 263 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 CBLN1P23435 193 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 PSMB9P28065 219 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 PSMB6P28072 239 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 MAS1LP35410 378 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 ARL3P36405 182 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 GABARAPL2P60520 117 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 KLK9Q2XQG4 91 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 FAM209BQ5JX69 171 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 CTRB2Q6GPI1 263 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 SFXN4Q6P4A7 337 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 ZNF773Q6PK81 442 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 TPRA1Q86W33 373 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 GVQW1Q8N7I0 195 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 OR5H6Q8NGV6 325 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 VSTM2AQ8TAG5 236 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 RNF167Q9H6Y7 350 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 RHBDL2Q9NX52 303 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 TECRQ9NZ01 308 aaKnown RBP6.35□□□□□ -1.39
USP28-203ENST00000537490 KLK9Q9UKQ9 250 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 RAB26Q9ULW5 256 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 DNAH7Q8WXX0 4024 aa6.35□□□□□ -1.39
USP28-203ENST00000537490 IGLV11-55A0A075B6I3 123 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 TRAV18A0A075B6X5 111 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 TRAV3A0A0B4J244 114 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 ZNF320A2RRD8 509 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 TMEM213A2RRL7 107 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 MFSD2BA6NFX1 497 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 SCGNO76038 276 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 HRASP01112 189 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 CLEC3BP05452 202 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 FCER2P06734 321 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 HLA-GP17693 338 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 FCGR2CP31995 323 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 SDC2P34741 201 aa6.34□□□□□ -1.39
USP28-203ENST00000537490 RPL8P62917 257 aaKnown RBP6.34□□□□□ -1.39
USP28-203ENST00000537490 MXD1Q05195 221 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms