RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 DEFA5Q01523 94 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 OR1N2Q8NGR9 330 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 VSTM2AQ8TAG5 236 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 C15orf40Q8WUR7 153 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 DIRAS2Q96HU8 199 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
GPN3-202ENST00000537466 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 E7EUB6 86 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 ACTL6BO94805 426 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 S1PR2O95136 353 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 HPRT1P00492 218 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
GPN3-202ENST00000537466 ZNF616Q08AN1 781 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 OR4A47Q6IF82 309 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 RSRP1Q9BUV0 290 aa13.39□□□□□ -0.27
GPN3-202ENST00000537466 RBM38Q9H0Z9 239 aaKnown RBP13.39□□□□□ -0.27
GPN3-202ENST00000537466 H3BUA1 57 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 GABARAPH6UMI1 98 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 MYOD1P15172 320 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
GPN3-202ENST00000537466 TAS2R31P59538 309 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 IL18Q14116 193 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 RNASE10Q5GAN6 216 aaKnown RBP13.38□□□□□ -0.27
GPN3-202ENST00000537466 CMTM1Q8IZ96 169 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 ADAD2Q8NCV1 583 aaKnown RBP13.38□□□□□ -0.27
GPN3-202ENST00000537466 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
GPN3-202ENST00000537466 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 BET1LQ9NYM9 111 aa13.38□□□□□ -0.27
GPN3-202ENST00000537466 IGHV4OR15-8A0A075B7B6 117 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 A0A087WW49 117 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 TRAV3A0A0B4J244 114 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 A0A1B0GW64 132 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 HMX3A6NHT5 357 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 MPPED1O15442 326 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 RBMXL2O75526 392 aaKnown RBP13.37□□□□□ -0.27
GPN3-202ENST00000537466 IL6RP08887 468 aaPredicted RBP13.37□□□□□ -0.27
GPN3-202ENST00000537466 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 RPA2P15927 270 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 NQO2P16083 231 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 F2RP25116 425 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 UCP3P55916 312 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 KRTAP10-11P60412 298 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 TMEM229BQ8NBD8 167 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 MCFD2Q8NI22 146 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 CD300LFQ8TDQ1 290 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 DGCR14Q96DF8 476 aaKnown RBP13.37□□□□□ -0.27
GPN3-202ENST00000537466 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
GPN3-202ENST00000537466 PLEKHA2Q9HB19 425 aa13.37□□□□□ -0.27
GPN3-202ENST00000537466 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
GPN3-202ENST00000537466 TEX22C9J3V5 150 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 BRI3O95415 125 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 PRH1P02810 166 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 CD74P04233 296 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 IFNA6P05013 189 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 TNFSF8P32971 234 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 RPL27AP46776 148 aaKnown RBP13.36□□□□□ -0.27
GPN3-202ENST00000537466 SLURP1P55000 103 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 MRPS10P82664 201 aaKnown RBP13.36□□□□□ -0.27
GPN3-202ENST00000537466 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 LPCAT3Q6P1A2 487 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 SMIM4Q8WVI0 70 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 DPF1Q92782 380 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 SPIN2AQ99865 258 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 SPIN2BQ9BPZ2 258 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 HRASLSQ9HDD0 168 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 COMMD9Q9P000 198 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 LINC01619G3V211 115 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 CTDSPLO15194 276 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 ZNF735P0CB33 412 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 TBPP20226 339 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 MAS1LP35410 378 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 LPAR6P43657 344 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 TAS2R19P59542 299 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
GPN3-202ENST00000537466 EGFEM1PQ0D2K5 195 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 FAAP20Q6NZ36 180 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 SLC38A6Q8IZM9 456 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 ARRDC1Q8N5I2 433 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 DMBX1Q8NFW5 382 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
GPN3-202ENST00000537466 AIFM2Q9BRQ8 373 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
GPN3-202ENST00000537466 RSL24D1Q9UHA3 163 aaKnown RBP13.36□□□□□ -0.27
GPN3-202ENST00000537466 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 UPK2O00526 184 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 HLA-GP17693 338 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 ZNF45Q02386 682 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
GPN3-202ENST00000537466 STEAP1BQ6NZ63 245 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
GPN3-202ENST00000537466 DCUN1D4Q92564 292 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms