RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 UBALD1Q8TB05 177 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 HARBI1Q96MB7 349 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR2V2Q96R30 315 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 MDFIQ99750 246 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPAG8Q99932 426 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 NUDT22Q9BRQ3 303 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 PLA2G2FQ9BZM2 168 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 STRADBQ9C0K7 418 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 NXF5Q9H1B4 397 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 DEPPQ9NTK1 212 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 A0A0G2JLM5 398 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C3orf85A0A1B0GTC6 90 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CXorf51AA0A1B0GTR3 108 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 NPIPB5A8MRT5 1133 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 K7EP34 96 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 BMPR1BO00238 502 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CD5LO43866 347 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SRSF10O75494 262 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 FCGR2BP31994 310 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 CDAP32320 146 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TAS2R46P59540 309 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 LCN2P80188 198 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TFF3Q07654 80 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MBNL2Q5VZF2 373 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 C22orf39Q6P5X5 142 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 AMTNQ6UX39 209 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TBC1D26Q86UD7 250 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 DOLPP1Q86YN1 238 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 LRTM2Q8N967 370 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR52N5Q8NH56 324 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SLC25A40Q8TBP6 338 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 GLMPQ8WWB7 406 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 P2RX4Q99571 388 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SSBP3Q9BWW4 388 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR2D2Q9H210 308 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MMP25Q9NPA2 562 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SLC7A10Q9NS82 523 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 ANXA10Q9UJ72 324 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 HS3ST3A1Q9Y663 406 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 R4GMQ9 66 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FAM186AA6NE01 2351 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 REV3LO60673 3130 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CACNA1HO95180 2353 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 LOC102725191A0A1B0GVB3 256 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 ISLRO14498 428 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CCL16O15467 120 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MLNRO43193 412 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TSPAN13O95857 204 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 GHRHP01286 108 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 HLA-DRB1P01911 266 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 STAG3L2P0CL84 134 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CTSEP14091 401 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 COL8A1P27658 744 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CFPP27918 469 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 HTR1DP28221 377 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CD38P28907 300 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TIMP3P35625 211 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 RPL32P62910 135 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 AESQ08117 197 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CD300EQ496F6 205 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 HES3Q5TGS1 186 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SLC25A34Q6PIV7 304 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TCF24Q7RTU0 167 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 DCAF4L2Q8NA75 395 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SLC38A9Q8NBW4 561 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR2A1Q8NGT9 310 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR51H1Q8NH63 302 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MBD3L1Q8WWY6 194 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 NEIL1Q96FI4 390 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 MRAP2Q96G30 205 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PBOV1Q9GZY1 135 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MS4A5Q9H3V2 200 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PRORYQ9H606 182 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SH2D2AQ9NP31 389 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MED29Q9NX70 200 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 JKAMPQ9P055 326 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SLC17A4Q9Y2C5 497 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 F11RQ9Y624 299 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 CABIN1Q9Y6J0 2220 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C2orf70A6NJV1 201 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 LINC01548A6NM66 108 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CDX4O14627 284 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 HSBP1O75506 76 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CER1O95813 267 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 HIST1H1EP10412 219 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 PNMTP11086 282 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FCGR2AP12318 317 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PRTN3P24158 256 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 SRD5A2P31213 254 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 GPR183P32249 361 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 RPS20P60866 119 aaKnown RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 UBE2G1P62253 170 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FUT7Q11130 342 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FOXL1Q12952 345 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms