RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CLCC1Q96S66 551 aa9.19□□□□□ -0.94
CDCA3-206ENST00000536241 RANBP3Q9H6Z4 567 aaPredicted RBP9.19□□□□□ -0.94
CDCA3-206ENST00000536241 METTL1Q9UBP6 276 aaKnown RBP9.19□□□□□ -0.94
CDCA3-206ENST00000536241 UPK2O00526 184 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 FCN1O00602 326 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 NDUFA3O95167 84 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 RELBQ01201 579 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 PJVKQ0ZLH3 352 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 PLGLAQ15195 96 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 MRGPRG-AS1Q2M3A8 158 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 GSG1LQ6UXU4 331 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
CDCA3-206ENST00000536241 FAM219AQ8IW50 185 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 CHAC2Q8WUX2 184 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 SSMEM1Q8WWF3 244 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 BET1LQ9NYM9 111 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 GSKIPQ9P0R6 139 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 KIAA1456Q9P272 454 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 CACNG5Q9UF02 275 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 SIGLEC9Q9Y336 463 aa9.18□□□□□ -0.94
CDCA3-206ENST00000536241 PLXNB1O43157 2135 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 A0A1B0GU03 582 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 BTBD17A6NE02 478 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 CRLF1O75462 422 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 SNAPC5O75971 98 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 KBTBD11O94819 623 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 OR2F2O95006 317 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 H2BFSP57053 126 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 SCGB2A2Q13296 93 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 C5orf64Q2M2E5 130 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 IAH1Q2TAA2 248 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-206ENST00000536241 PPP1R27Q86WC6 154 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 Q8N9W7 124 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 OR8H1Q8NGG4 311 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 OR4A16Q8NH70 328 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 OR5R1Q8NH85 324 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 VSTM2AQ8TAG5 236 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 TMEM167AQ8TBQ9 72 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 C2orf50Q96LR7 162 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-206ENST00000536241 PITPNC1Q9UKF7 332 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 TNCP24821 2201 aa9.17□□□□□ -0.94
CDCA3-206ENST00000536241 RBMXL2O75526 392 aaKnown RBP9.16□□□□□ -0.94
CDCA3-206ENST00000536241 NXPH3O95157 252 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 SPDEFO95238 335 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 OPN1MWP04001 364 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 OPN1MW2P0DN77 364 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 OPN1MW3P0DN78 364 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 MYOD1P15172 320 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 SMCO1Q147U7 214 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
CDCA3-206ENST00000536241 FAM71E2Q8N5Q1 922 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 OR1S1Q8NH92 325 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 RASL11BQ9BPW5 248 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
CDCA3-206ENST00000536241 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-206ENST00000536241 SH2D7A6NKC9 451 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 CHST1O43916 411 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 PITX3O75364 302 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 AMY1AP04745 511 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 FAM157CP0CG43 387 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 SLC25A6P12236 298 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 OR2B8PP59922 312 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 CD83Q01151 205 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 IL15RAQ13261 267 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 PRSS8Q16651 343 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 CXorf66Q5JRM2 361 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 ZBTB8BQ8NAP8 495 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 SPIN2AQ99865 258 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 SPIN2BQ9BPZ2 258 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 QTRT1Q9BXR0 403 aaKnown RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 ZNF436Q9C0F3 470 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-206ENST00000536241 VPREB3Q9UKI3 123 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 POMT1Q9Y6A1 747 aa9.15□□□□□ -0.94
CDCA3-206ENST00000536241 TEX50A0A1B0GTY4 177 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 E7EUB6 86 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 ST8SIA3O43173 380 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 CA2P00918 260 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 GNB1P62873 340 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 BLCAPP62952 87 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 TNXAQ16473 311 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 MMD2Q8IY49 270 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 OR4D5Q8NGN0 318 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 ZNF418Q8TF45 676 aaPredicted RBP9.15□□□□□ -0.95
CDCA3-206ENST00000536241 ESM1Q9NQ30 184 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 TMEM14BQ9NUH8 114 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 COA4Q9NYJ1 87 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 PRNDQ9UKY0 176 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.95
CDCA3-206ENST00000536241 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms