RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CA2P00918 260 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 HRASP01112 189 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 IGF1P05019 195 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 LPAR6P43657 344 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
CHD4-203ENST00000535717 C10orf99Q6UWK7 81 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 ZNF562Q6V9R5 426 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 CENPVQ7Z7K6 275 aaPredicted RBP9.5□□□□□ -0.89
CHD4-203ENST00000535717 STPG2Q8N412 459 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 TCTEX1D1Q8N7M0 179 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 TEX45Q8NA69 505 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 RHOVQ96L33 236 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 CITED1Q99966 193 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 AIFM2Q9BRQ8 373 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 PLEKHA2Q9HB19 425 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 PARP11Q9NR21 331 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 COPZ2Q9P299 210 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 C14orf166Q9Y224 244 aaKnown RBP9.5□□□□□ -0.89
CHD4-203ENST00000535717 VSIG4Q9Y279 399 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 FBXO7Q9Y3I1 522 aa9.5□□□□□ -0.89
CHD4-203ENST00000535717 ARPC1BO15143 372 aaKnown RBP9.49□□□□□ -0.89
CHD4-203ENST00000535717 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 EGR2P11161 476 aaPredicted RBP9.49□□□□□ -0.89
CHD4-203ENST00000535717 TAS2R31P59538 309 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 PRSS8Q16651 343 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 SHISA2Q6UWI4 295 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 SSX9Q7RTT3 188 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 NOXA1Q86UR1 476 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 PUSL1Q8N0Z8 303 aaKnown RBP9.49□□□□□ -0.89
CHD4-203ENST00000535717 C11orf44Q8N8P7 122 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 CCDC71LQ8N9Z2 235 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 OR5AU1Q8NGC0 362 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 ZNF430Q9H8G1 570 aaPredicted RBP9.49□□□□□ -0.89
CHD4-203ENST00000535717 FAM212BQ9NTI7 297 aaPredicted RBP9.49□□□□□ -0.89
CHD4-203ENST00000535717 COMMD9Q9P000 198 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 WSB1Q9Y6I7 421 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 TNCP24821 2201 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 PKD1L1Q8TDX9 2849 aa9.49□□□□□ -0.89
CHD4-203ENST00000535717 C3orf85A0A1B0GTC6 90 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 PSMB11A5LHX3 300 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 NAP1L6A6NFF2 107 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 H0Y980 276 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 PLA2G10O15496 165 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 OR2A4O95047 310 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 IGKV1-39P01597 117 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 IGKV1D-39P04432 117 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 CD28P10747 220 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 RPA2P15927 270 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 NQO2P16083 231 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 CCR6P51684 374 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 GNB1P62873 340 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 FXYD3Q14802 87 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 ZNF329Q86UD4 541 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 ADAD2Q8NCV1 583 aaKnown RBP9.48□□□□□ -0.89
CHD4-203ENST00000535717 VSTM2AQ8TAG5 236 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 ARPC1AQ92747 370 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 R3HDM4Q96D70 268 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 SCGB3A2Q96PL1 93 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 OR2A7Q96R45 310 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
CHD4-203ENST00000535717 CRYM-AS1A6NIL9 109 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 G3V318 75 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 FBXO24O75426 580 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 KBTBD11O94819 623 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 CNIH1O95406 144 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 KRASP01116 189 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 SERPINE2P07093 398 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 IL6RP08887 468 aaPredicted RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 SPNP16150 400 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 BTCP35070 178 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 CRIP2P52943 208 aaPredicted RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 CFHR3Q02985 330 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 SP6Q3SY56 376 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 MMD2Q8IY49 270 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 DMBX1Q8NFW5 382 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 ABHD5Q8WTS1 349 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 TMEM230Q96A57 120 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 SLC25A21Q9BQT8 299 aaPredicted RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 C7orf50Q9BRJ6 194 aaKnown RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 FAM103A1Q9BTL3 118 aaKnown RBP9.47□□□□□ -0.89
CHD4-203ENST00000535717 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 TMEM140Q9NV12 185 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 BET1LQ9NYM9 111 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 NUBP2Q9Y5Y2 271 aa9.47□□□□□ -0.89
CHD4-203ENST00000535717 TRAV3A0A0B4J244 114 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 TEX13DA0A0J9YY54 714 aaPredicted RBP9.46□□□□□ -0.9
CHD4-203ENST00000535717 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 MARCH11A6NNE9 402 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 UPK2O00526 184 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.9
CHD4-203ENST00000535717 OR5AC1P0C628 307 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 485.1 ms