RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 SECTM1Q8WVN6 248 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 SLC25A38Q96DW6 304 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 DIABLOQ9NR28 239 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 ZNF257Q9Y2Q1 563 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 HMX3A6NHT5 357 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 BMPR1BO00238 502 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 OR2J3O76001 311 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 C15orf32Q32M92 178 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 PUSL1Q8N0Z8 303 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 GVQW1Q8N7I0 195 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 FYTTD1Q96QD9 318 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 AIFM2Q9BRQ8 373 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
CLSTN3-204ENST00000535313 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 TEX22C9J3V5 150 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 TNFSF12O43508 249 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 TMEM127O75204 238 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 PPYP01298 95 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 MSMO1Q15800 293 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 ZBTB34Q8NCN2 500 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 GPHA2Q96T91 129 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 TM2D3Q9BRN9 247 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 AUNIPQ9H7T9 357 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 TUBA4BQ9H853 241 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 CCL28Q9NRJ3 127 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 SLC2A9Q9NRM0 540 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
CLSTN3-204ENST00000535313 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 DHFRP00374 187 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 PTHLHP12272 177 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 CBX5P45973 191 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 BRWD1-AS2P59051 145 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 RPL8P62917 257 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 OR2K2Q8NGT1 345 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 SLC5A7Q9GZV3 580 aa12.3□□□□□ -0.44
CLSTN3-204ENST00000535313 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 FCER2P06734 321 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 ZNF735P0CB33 412 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 LYL1P12980 280 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 FXYD4P59646 89 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 CATR1Q13166 79 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 CROCCP3Q8IVE0 287 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 SPAG16Q8N0X2 631 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 DYNLRB2Q8TF09 96 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 CITED4Q96RK1 184 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 THAP7Q9BT49 309 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 FUNDC2Q9BWH2 189 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 PALMDQ9NP74 551 aa12.29□□□□□ -0.44
CLSTN3-204ENST00000535313 IZUMO1RA6ND01 250 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 PPP5D1E7EU14 171 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 E7EUB6 86 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 SULT1C2O00338 296 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 RBFOX2O43251 390 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 CRYGCP07315 174 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 AREGP15514 252 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 HIST1H1BP16401 226 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 HLA-GP17693 338 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 PSMB6P28072 239 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 MECP2P51608 486 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 GIMAP1Q8WWP7 306 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 IFT46Q9NQC8 304 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 BET1LQ9NYM9 111 aa12.28□□□□□ -0.44
CLSTN3-204ENST00000535313 MEIS3P1A6NDR6 274 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 XRCC3O43542 346 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 DEFA4P12838 97 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 TAS2R31P59538 309 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 HERV-K104P61576 105 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 TMEM17Q86X19 198 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 LAX1Q8IWV1 398 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 BORCS5Q969J3 196 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 VCX3AQ9NNX9 186 aa12.27□□□□□ -0.45
CLSTN3-204ENST00000535313 A0A1B0GW64 132 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 NDUFB8O95169 186 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 OR2C1O95371 312 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 HPRT1P00492 218 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 NQO2P16083 231 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 CTRB1P17538 263 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 ARL3P36405 182 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 CTF1Q16619 201 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms