RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 MLXQ9UH92 298 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 OR2W1Q9Y3N9 320 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 TMEM213A2RRL7 107 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 NPIPB5A8MRT5 1133 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 PDCD5O14737 125 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 RANBP1P43487 201 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 SLC25A42Q86VD7 318 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
UBXN1-216ENST00000533908 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 FYTTD1Q96QD9 318 aaKnown RBP13.5□□□□□ -0.25
UBXN1-216ENST00000533908 OVOL2Q9BRP0 275 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 ATG5Q9H1Y0 275 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
UBXN1-216ENST00000533908 SMIM30A4D0T7 59 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 CREBL2O60519 120 aaPredicted RBP13.49□□□□□ -0.25
UBXN1-216ENST00000533908 KBTBD11O94819 623 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 CRYGCP07315 174 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 DTYMKP23919 212 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 RPL27AP46776 148 aaKnown RBP13.49□□□□□ -0.25
UBXN1-216ENST00000533908 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 UXS1Q8NBZ7 420 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 OR2A7Q96R45 310 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 PRELID3BQ9Y3B1 194 aa13.49□□□□□ -0.25
UBXN1-216ENST00000533908 ZNF320A2RRD8 509 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 METTL21EPA6NDL7 271 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 RAB3BP20337 219 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 ARL3P36405 182 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 EWSR1Q01844 656 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBXN1-216ENST00000533908 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 CENPOQ9BU64 300 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 SPATA2Q9UM82 520 aa13.48□□□□□ -0.25
UBXN1-216ENST00000533908 SSX5O60225 188 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 SCAF4O95104 1147 aaKnown RBP13.47□□□□□ -0.25
UBXN1-216ENST00000533908 CTRB1P17538 263 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 PSMB6P28072 239 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 ZNF57Q68EA5 555 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-216ENST00000533908 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 MFSD4AQ8N468 514 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 NUDCD2Q8WVJ2 157 aa13.47□□□□□ -0.25
UBXN1-216ENST00000533908 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
UBXN1-216ENST00000533908 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 DPPA5A6NC42 116 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 MFSD2BA6NFX1 497 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 A8MWP6 167 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 REG1AP05451 166 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 CNIH2Q6PI25 160 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 OR52B4Q8NGK2 314 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 TCTEX1D2Q8WW35 142 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 LINC00476Q8WZB0 136 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 GGTLC1Q9BX51 225 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 NDUFB11Q9NX14 153 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 TAS2R8Q9NYW2 309 aa13.46□□□□□ -0.25
UBXN1-216ENST00000533908 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 TMEM235A6NFC5 223 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 CLEC3BP05452 202 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 PTHLHP12272 177 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 CD36P16671 472 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 MYL9P24844 172 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 MAS1LP35410 378 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 TBCEQ15813 527 aaPredicted RBP13.45□□□□□ -0.26
UBXN1-216ENST00000533908 FAM106AQ4KMX7 169 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 BTNL8Q6UX41 500 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 OR4S2Q8NH73 311 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 VSTM2AQ8TAG5 236 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 HSD17B10Q99714 261 aaKnown RBP13.45□□□□□ -0.26
UBXN1-216ENST00000533908 DCSTAMPQ9H295 470 aa13.45□□□□□ -0.26
UBXN1-216ENST00000533908 LOC102724200A0A096LPH7 203 aaPredicted RBP13.44□□□□□ -0.26
UBXN1-216ENST00000533908 SLC22A5O76082 557 aa13.44□□□□□ -0.26
UBXN1-216ENST00000533908 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
UBXN1-216ENST00000533908 EEF1AKMT3Q96AZ1 226 aa13.44□□□□□ -0.26
UBXN1-216ENST00000533908 ANXA10Q9UJ72 324 aa13.44□□□□□ -0.26
UBXN1-216ENST00000533908 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
UBXN1-216ENST00000533908 IGHV3-35A0A0C4DH35 117 aa13.43□□□□□ -0.26
UBXN1-216ENST00000533908 RPL8P62917 257 aaKnown RBP13.43□□□□□ -0.26
UBXN1-216ENST00000533908 ARL6IP1Q15041 203 aa13.43□□□□□ -0.26
UBXN1-216ENST00000533908 KRTAP17-1Q9BYP8 105 aa13.43□□□□□ -0.26
UBXN1-216ENST00000533908 CCL28Q9NRJ3 127 aa13.43□□□□□ -0.26
UBXN1-216ENST00000533908 A0A0J9YWU9 116 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 TNFSF12O43508 249 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 LY6G6CO95867 125 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 HLA-GP17693 338 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 OR2B8PP59922 312 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 OR4A47Q6IF82 309 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 ZNF502Q8TBZ5 544 aa13.42□□□□□ -0.26
UBXN1-216ENST00000533908 TRBV7-1A0A0A6YYK4 115 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms