RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 PHB2Q99623 299 aa13.49□□□□□ -0.25
CTSB-223ENST00000532370 E7EUB6 86 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 RBFOX2O43251 390 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTSB-223ENST00000532370 RBMXL2O75526 392 aaKnown RBP13.48□□□□□ -0.25
CTSB-223ENST00000532370 ACTL6BO94805 426 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 S1PR2O95136 353 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 HRASP01112 189 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 MYOD1P15172 320 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 RPA2P15927 270 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 CD40LGP29965 261 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 OR4D10Q8NGI6 311 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 TMEM167AQ8TBQ9 72 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 FCAMRQ8WWV6 532 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 DIRAS2Q96HU8 199 aa13.48□□□□□ -0.25
CTSB-223ENST00000532370 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 A0A1B0GW64 132 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 HMX3A6NHT5 357 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 GPR31O00270 319 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 PRH1P02810 166 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
CTSB-223ENST00000532370 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 OR4A47Q6IF82 309 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 ADAD2Q8NCV1 583 aaKnown RBP13.47□□□□□ -0.25
CTSB-223ENST00000532370 VSTM2AQ8TAG5 236 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 C15orf40Q8WUR7 153 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 TMEM68Q96MH6 324 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 SLA2Q9H6Q3 261 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 TNCP24821 2201 aa13.47□□□□□ -0.25
CTSB-223ENST00000532370 TEX22C9J3V5 150 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 GABARAPH6UMI1 98 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 MPPED1O15442 326 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 CREBL2O60519 120 aaPredicted RBP13.46□□□□□ -0.25
CTSB-223ENST00000532370 DUS4LO95620 317 aaKnown RBP13.46□□□□□ -0.25
CTSB-223ENST00000532370 HPRT1P00492 218 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.25
CTSB-223ENST00000532370 TAS2R31P59538 309 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 RNASE10Q5GAN6 216 aaKnown RBP13.46□□□□□ -0.25
CTSB-223ENST00000532370 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 BORCS5Q969J3 196 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 RSRP1Q9BUV0 290 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 HRASLSQ9HDD0 168 aa13.46□□□□□ -0.25
CTSB-223ENST00000532370 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.25
CTSB-223ENST00000532370 IGHV4OR15-8A0A075B7B6 117 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 A0A087WW49 117 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 H3BUA1 57 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 IFNA6P05013 189 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 OR9G9P0C7N8 305 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 NQO2P16083 231 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 F2RP25116 425 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 TNFSF8P32971 234 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 LPAR6P43657 344 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 SLURP1P55000 103 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 RPL8P62917 257 aaKnown RBP13.45□□□□□ -0.26
CTSB-223ENST00000532370 IL18Q14116 193 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 ZNF585BQ52M93 769 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 TMEM229BQ8NBD8 167 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 DPF1Q92782 380 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 FYTTD1Q96QD9 318 aaKnown RBP13.45□□□□□ -0.26
CTSB-223ENST00000532370 SPIN2AQ99865 258 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 SPIN2BQ9BPZ2 258 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
CTSB-223ENST00000532370 PLEKHA2Q9HB19 425 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
CTSB-223ENST00000532370 CD74P04233 296 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 OR8U8P0C7N1 319 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 HLA-GP17693 338 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 PI3P19957 117 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 RPL27AP46776 148 aaKnown RBP13.44□□□□□ -0.26
CTSB-223ENST00000532370 UCP3P55916 312 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 POU2AF1Q16633 256 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 FAAP20Q6NZ36 180 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 TBC1D26Q86UD7 250 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 LHFPL1Q86WI0 220 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 SLC38A6Q8IZM9 456 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 TTC9CQ8N5M4 171 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 DMBX1Q8NFW5 382 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 SMIM4Q8WVI0 70 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 SOSTQ9BQB4 213 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
CTSB-223ENST00000532370 C13orf42A0A1B0GVH6 325 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 ANKRD34BA5PLL1 514 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 CGB1A6NKQ9 187 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 LINC01619G3V211 115 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 UPK2O00526 184 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 BRI3O95415 125 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 TGP01266 2768 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 ZNF735P0CB33 412 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 AREGP15514 252 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 TBPP20226 339 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 TAS2R19P59542 299 aa13.43□□□□□ -0.26
CTSB-223ENST00000532370 MRPS10P82664 201 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms