RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LPAR6P43657 344 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 ERVK-16P61578 105 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 DHRS2Q13268 280 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 PSG5Q15238 335 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 OR2B11Q5JQS5 317 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 PUSL1Q8N0Z8 303 aaKnown RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 LGI3Q8N145 548 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 Q8N9W7 124 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 CHPT1Q8WUD6 406 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 RBPMSQ93062 196 aaKnown RBP9.96□□□□□ -0.82
COPB1-208ENST00000532088 CHIAQ9BZP6 476 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 BET1LQ9NYM9 111 aa9.96□□□□□ -0.82
COPB1-208ENST00000532088 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
COPB1-208ENST00000532088 SNRPGP15A8MWD9 76 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 GPR137BO60478 399 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 OR2A4O95047 310 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 S1PR2O95136 353 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 IL6RP08887 468 aaPredicted RBP9.95□□□□□ -0.82
COPB1-208ENST00000532088 LY6EQ16553 131 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 TRIM16LQ309B1 348 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 C4orf46Q504U0 113 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 FBLN7Q53RD9 439 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 COQ8AQ8NI60 647 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 ZNF431Q8TF32 576 aaPredicted RBP9.95□□□□□ -0.82
COPB1-208ENST00000532088 MITD1Q8WV92 249 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 R3HDM4Q96D70 268 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 RITA1Q96K30 269 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 OR2A7Q96R45 310 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 GPN1Q9HCN4 374 aaPredicted RBP9.95□□□□□ -0.82
COPB1-208ENST00000532088 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
COPB1-208ENST00000532088 MARCH11A6NNE9 402 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 CHST1O43916 411 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 HLA-DRB1P01911 266 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 SAA1P0DJI8 122 aaPredicted RBP9.94□□□□□ -0.82
COPB1-208ENST00000532088 SPNP16150 400 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 F2RL1P55085 397 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 RAB25P57735 213 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 HNF4GQ14541 408 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 SP6Q3SY56 376 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
COPB1-208ENST00000532088 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 LSM10Q969L4 123 aaKnown RBP9.94□□□□□ -0.82
COPB1-208ENST00000532088 SEC22AQ96IW7 307 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 PHB2Q99623 299 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 NPFFR1Q9GZQ6 430 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 METTL1Q9UBP6 276 aaKnown RBP9.94□□□□□ -0.82
COPB1-208ENST00000532088 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 MTORP42345 2549 aa9.94□□□□□ -0.82
COPB1-208ENST00000532088 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
COPB1-208ENST00000532088 SLC25A17O43808 307 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 KBTBD11O94819 623 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 AMY1AP04745 511 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 P0C879 139 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 VDAC1P21796 283 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 CNTFRP26992 372 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 MAS1LP35410 378 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 OR4A47Q6IF82 309 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 PPP1R27Q86WC6 154 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 Q8N2B8 174 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 DMBX1Q8NFW5 382 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 LHFPL5Q8TAF8 219 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 RRNAD1Q96FB5 475 aaKnown RBP9.93□□□□□ -0.82
COPB1-208ENST00000532088 TMEM140Q9NV12 185 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 MMP24Q9Y5R2 645 aa9.93□□□□□ -0.82
COPB1-208ENST00000532088 MXRA5Q9NR99 2828 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 C7orf66A4D0T2 115 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 KCNAB3O43448 404 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 TSPAN9O75954 239 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 NDUFA7O95182 113 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 KRASP01116 189 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 CRYBA1P05813 215 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 SLC25A6P12236 298 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 G6PCP35575 357 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 AKR1C2P52895 323 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 PRSS8Q16651 343 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 LIN54Q6MZP7 749 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 H2BFWTQ7Z2G1 175 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 LURAP1LQ8IV03 231 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 SLC35G3Q8N808 338 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 CASTOR1Q8WTX7 329 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 PRSS22Q9GZN4 317 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 FBXL15Q9H469 300 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 COA4Q9NYJ1 87 aa9.92□□□□□ -0.82
COPB1-208ENST00000532088 DBX1A6NMT0 343 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms