RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 SYNJ2BPP57105 145 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 BRWD1-AS2P59051 145 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 TAS2R46P59540 309 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 NCS1P62166 190 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 KLF5Q13887 457 aaPredicted RBP10.2□□□□□ -0.78
VPS28-211ENST00000530790 RPEL1Q2QD12 228 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 AADACL3Q5VUY0 350 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 ZNF818PQ6ZRF7 136 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 HAPLN4Q86UW8 402 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 OR5H2Q8NGV7 314 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 OR51H1Q8NH63 302 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 FYTTD1Q96QD9 318 aaKnown RBP10.2□□□□□ -0.78
VPS28-211ENST00000530790 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 ANAPC10Q9UM13 185 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 ZNF257Q9Y2Q1 563 aa10.2□□□□□ -0.78
VPS28-211ENST00000530790 TRBV9A0A0B4J1U6 114 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 HMX3A6NHT5 357 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 NPIPB5A8MRT5 1133 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 TEX22C9J3V5 150 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 RBMXL2O75526 392 aaKnown RBP10.19□□□□□ -0.78
VPS28-211ENST00000530790 IGLV1-51P01701 117 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 PRSS3P35030 304 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 VBP1P61758 197 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 RPL8P62917 257 aaKnown RBP10.19□□□□□ -0.78
VPS28-211ENST00000530790 ZNF45Q02386 682 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 ATP5G2Q06055 141 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 TATDN3Q17R31 274 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 NECAP1Q8NC96 275 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 OR4A5Q8NH83 315 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 HRASLSQ9HDD0 168 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 BET1LQ9NYM9 111 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 COMMD3Q9UBI1 195 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 U3KQK5 164 aa10.19□□□□□ -0.78
VPS28-211ENST00000530790 SMIM31A0A1B0GVY4 71 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 DHFRP00374 187 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 HPRT1P00492 218 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 APOA1P02647 267 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 PMP2P02689 132 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
VPS28-211ENST00000530790 ZNF735P0CB33 412 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 NQO2P16083 231 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 HLA-GP17693 338 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 RFX2P48378 723 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 TAS2R31P59538 309 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 C15orf32Q32M92 178 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 FAM209BQ5JX69 171 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 CD300LFQ8TDQ1 290 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 MOB3AQ96BX8 217 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 WWC2-AS2Q96NR7 200 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 ASCL2Q99929 193 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 ZNF2Q9BSG1 426 aaPredicted RBP10.18□□□□□ -0.78
VPS28-211ENST00000530790 SLC2A9Q9NRM0 540 aa10.18□□□□□ -0.78
VPS28-211ENST00000530790 BMPR1BO00238 502 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 OR2J3O76001 311 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 S1PR2O95136 353 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 RLN1P04808 185 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 IL6RP08887 468 aaPredicted RBP10.17□□□□□ -0.78
VPS28-211ENST00000530790 NAT1P18440 290 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 ERVK-16P61578 105 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 CMTM3Q96MX0 182 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 COMMD9Q9P000 198 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 ADAM30Q9UKF2 790 aa10.17□□□□□ -0.78
VPS28-211ENST00000530790 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.16□□□□□ -0.78
VPS28-211ENST00000530790 A0A1B0GW64 132 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 H0Y980 276 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 GABARAPO95166 117 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 FRMD6-AS1P0C7T7 363 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 SMIM18P0DKX4 95 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 AREGP15514 252 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 PSMB6P28072 239 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 GNRHRP30968 328 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 HRH1P35367 487 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 RORCP51449 518 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 POU2AF1Q16633 256 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 LCN12Q6JVE5 192 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 DHRS11Q6UWP2 260 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 C19orf35Q6ZS72 473 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 CMTM1Q8IZ96 169 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 COMMD5Q9GZQ3 224 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 SCPEP1Q9HB40 452 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 TMEM140Q9NV12 185 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
VPS28-211ENST00000530790 E7EUB6 86 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 REG1AP05451 166 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 CRYGCP07315 174 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 DEFA4P12838 97 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 MYOD1P15172 320 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
VPS28-211ENST00000530790 ELK1P19419 428 aa10.15□□□□□ -0.78
VPS28-211ENST00000530790 RCVRNP35243 200 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms