RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 DPPA5A6NC42 116 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 METTL21EPA6NDL7 271 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 IFITM5A6NNB3 132 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 J3QRK9 145 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 SLC22A5O76082 557 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 KBTBD11O94819 623 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 LY6G6CO95867 125 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 IGHV3-23P01764 117 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 CTXN2P0C2S0 81 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 DTYMKP23919 212 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 KCTD9Q7L273 389 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 WFDC3Q8IUB2 231 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.62
CAPN1-219ENST00000530495 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
CAPN1-219ENST00000530495 MGLLQ99685 303 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 ST6GALNAC5Q9BVH7 336 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 VCXQ9H320 206 aa11.15□□□□□ -0.62
CAPN1-219ENST00000530495 RBMX2Q9Y388 322 aaKnown RBP11.15□□□□□ -0.62
CAPN1-219ENST00000530495 PDCD5O14737 125 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 RGS10O43665 173 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 DHFRP00374 187 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 CD36P16671 472 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 PSMB6P28072 239 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 RPL27AP46776 148 aaKnown RBP11.14□□□□□ -0.63
CAPN1-219ENST00000530495 OR10A3P58181 314 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-219ENST00000530495 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 OR4A47Q6IF82 309 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
CAPN1-219ENST00000530495 ELF5Q9UKW6 265 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-219ENST00000530495 S4R3C0 116 aa11.14□□□□□ -0.63
CAPN1-219ENST00000530495 PLECQ15149 4684 aaKnown RBP11.14□□□□□ -0.63
CAPN1-219ENST00000530495 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 CXorf65A6NEN9 183 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 NUPR2A6NF83 97 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 SCAF4O95104 1147 aaKnown RBP11.13□□□□□ -0.63
CAPN1-219ENST00000530495 C8orf88P0DMB2 117 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 AREGP15514 252 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 HIST1H1BP16401 226 aaKnown RBP11.13□□□□□ -0.63
CAPN1-219ENST00000530495 CTRB1P17538 263 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 NFYAP23511 347 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-219ENST00000530495 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 TM4SF20Q53R12 229 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 MARC2Q969Z3 335 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
CAPN1-219ENST00000530495 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 IGKV1D-13A0A0B4J2D9 117 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 A0A0J9YWU9 116 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 CLEC3BP05452 202 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 IGKV1-13P0DP09 117 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 CDNFQ49AH0 187 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-219ENST00000530495 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 Q6ZWC4 215 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 PRSS48Q7RTY5 328 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
CAPN1-219ENST00000530495 MRPL27Q9P0M9 148 aaKnown RBP11.12□□□□□ -0.63
CAPN1-219ENST00000530495 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 HRASP01112 189 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-219ENST00000530495 RAB3BP20337 219 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 GALP22466 123 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 BMI1P35226 326 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 EWSR1Q01844 656 aaKnown RBP eCLIP11.11□□□□□ -0.63
CAPN1-219ENST00000530495 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 CNIH2Q6PI25 160 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 UNQ9165/PRO28630Q6UXU0 137 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
CAPN1-219ENST00000530495 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 SPATA2Q9UM82 520 aa11.11□□□□□ -0.63
CAPN1-219ENST00000530495 CGB1A6NKQ9 187 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 SPRY2O43597 315 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 DEFA4P12838 97 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 CRHBPP24387 322 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 APOC4P55056 127 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 ELLP55199 621 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-219ENST00000530495 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
CAPN1-219ENST00000530495 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 ZNF66Q6ZN08 573 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 OR2C3Q8N628 320 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 OR4A5Q8NH83 315 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 C5orf66Q9H5L9 145 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
CAPN1-219ENST00000530495 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms