RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CHAC2Q8WUX2 184 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 PDCD10Q9BUL8 212 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 MEGF9Q9H1U4 602 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 SHPKQ9UHJ6 478 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
SOX6-213ENST00000530378 FAM90A9PA6NNJ1 464 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 SMLR1H3BR10 107 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 NBR2O15453 112 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 CHST1O43916 411 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 IFNA21P01568 189 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 SULT1A3P0DMM9 295 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 SULT1A4P0DMN0 295 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 BPIFB3P59826 476 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 IAH1Q2TAA2 248 aaPredicted RBP8.5□□□□□ -1.05
SOX6-213ENST00000530378 NMSQ5H8A3 153 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 C10orf55Q5SWW7 151 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 C11orf87Q6NUJ2 197 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 FOXRED2Q8IWF2 684 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 LRTM2Q8N967 370 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 SLC25A33Q9BSK2 321 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 RANBP3Q9H6Z4 567 aaPredicted RBP8.5□□□□□ -1.05
SOX6-213ENST00000530378 APELAP0DMC3 54 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 VDAC1P21796 283 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 IER3P46695 156 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 VMA21Q3ZAQ7 101 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 LRRC37A5PQ49AS3 106 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
SOX6-213ENST00000530378 GSG1LQ6UXU4 331 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 TEX29Q8N6K0 151 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 Q8N6K4 173 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 TAF15Q92804 592 aaKnown RBP eCLIP8.5□□□□□ -1.05
SOX6-213ENST00000530378 IL22RA2Q969J5 263 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 TSNAXQ99598 290 aaKnown RBP8.5□□□□□ -1.05
SOX6-213ENST00000530378 QTRT1Q9BXR0 403 aaKnown RBP8.5□□□□□ -1.05
SOX6-213ENST00000530378 RAB18Q9NP72 206 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 CDC42EP3Q9UKI2 254 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 TCF19Q9Y242 345 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 MMP24Q9Y5R2 645 aa8.5□□□□□ -1.05
SOX6-213ENST00000530378 FCN1O00602 326 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 KBTBD11O94819 623 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 OR2A4O95047 310 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 P0C879 139 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 S100A10P60903 97 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 UBE2KP61086 200 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 SRSF2Q01130 221 aaKnown RBP8.49□□□□□ -1.05
SOX6-213ENST00000530378 C9orf152Q5JTZ5 239 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 Q6YL49 198 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 OR4A16Q8NH70 328 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 OR2A7Q96R45 310 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 HINT2Q9BX68 163 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 ZNF436Q9C0F3 470 aaPredicted RBP8.49□□□□□ -1.05
SOX6-213ENST00000530378 MAGT1Q9H0U3 335 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 ZNF430Q9H8G1 570 aaPredicted RBP8.49□□□□□ -1.05
SOX6-213ENST00000530378 RANGRFQ9HD47 186 aaPredicted RBP8.49□□□□□ -1.05
SOX6-213ENST00000530378 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
SOX6-213ENST00000530378 TMEM160Q9NX00 188 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 KIAA1456Q9P272 454 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
SOX6-213ENST00000530378 A6NDX4 124 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 BTBD17A6NE02 478 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 HMX3A6NHT5 357 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 RRHO14718 337 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 ATG12O94817 140 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 OR2F2O95006 317 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 DYNLT3P51808 116 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 RELBQ01201 579 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 EBI3Q14213 229 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 RBMS3Q6XE24 437 aaKnown RBP8.48□□□□□ -1.05
SOX6-213ENST00000530378 PUSL1Q8N0Z8 303 aaKnown RBP8.48□□□□□ -1.05
SOX6-213ENST00000530378 ZBTB8BQ8NAP8 495 aaPredicted RBP8.48□□□□□ -1.05
SOX6-213ENST00000530378 LSM10Q969L4 123 aaKnown RBP8.48□□□□□ -1.05
SOX6-213ENST00000530378 FYTTD1Q96QD9 318 aaKnown RBP8.48□□□□□ -1.05
SOX6-213ENST00000530378 PLSCR3Q9NRY6 295 aa8.48□□□□□ -1.05
SOX6-213ENST00000530378 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 DNAJC9-AS1A6NH13 148 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 UPK2O00526 184 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 CA2P00918 260 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 LGALS7P47929 136 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SMCO1Q147U7 214 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 TNXAQ16473 311 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 C5orf64Q2M2E5 130 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 CXorf66Q5JRM2 361 aaPredicted RBP8.47□□□□□ -1.05
SOX6-213ENST00000530378 ABHD5Q8WTS1 349 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SSMEM1Q8WWF3 244 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 VPREB3Q9UKI3 123 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SIGLEC9Q9Y336 463 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 MOB4Q9Y3A3 225 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 LSM5Q9Y4Y9 91 aaKnown RBP8.47□□□□□ -1.05
SOX6-213ENST00000530378 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 ST8SIA3O43173 380 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 CCNKO75909 580 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SNAPC5O75971 98 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 RPL8P62917 257 aaKnown RBP8.47□□□□□ -1.05
SOX6-213ENST00000530378 POU2AF1Q16633 256 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 AKAP14Q86UN6 197 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 PPP1R27Q86WC6 154 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 THNSL2Q86YJ6 484 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms