RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 CLEC9AQ6UXN8 241 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 OR4A16Q8NH70 328 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
TTC39A-216ENST00000530004 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
TTC39A-216ENST00000530004 SHOXO15266 292 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 IFNA7P01567 189 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 ARHGDIBP52566 201 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 UBE2KP61086 200 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 UBA52P62987 128 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 EXOSC2Q13868 293 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 OR4A47Q6IF82 309 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 RPEQ96AT9 228 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 QTRT1Q9BXR0 403 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 RBKSQ9H477 322 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 SRRM4A7MD48 611 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 RNASEK-C17orf49H0YIS7 233 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 H3BP45 60 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 MED6O75586 246 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 HOXB4P17483 251 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 RAB13P51153 203 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 RPL23AP62750 156 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 PDZD9Q8IXQ8 264 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 TMEM252Q8N6L7 170 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 LHX4Q969G2 390 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 BSCL2Q96G97 398 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-216ENST00000530004 HARBI1Q96MB7 349 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 SLC25A31Q9H0C2 315 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
TTC39A-216ENST00000530004 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 ODF3BA8MYP8 253 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 TAAR5O14804 337 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 TXNL1O43396 289 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 HTR1DP28221 377 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 MC5RP33032 325 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 RELBQ01201 579 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 NHLH2Q02577 135 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 LDLRAD2Q5SZI1 272 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 OR4C13Q8NGP0 309 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 AIFM2Q9BRQ8 373 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 UBQLN2Q9UHD9 624 aa11.61□□□□□ -0.55
TTC39A-216ENST00000530004 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 CENPVL3A0A0U1RRI6 287 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 LEUTXA8MZ59 168 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 AARDQ4LEZ3 155 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 TPTE2P1Q5T6R2 138 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 MOB3BQ86TA1 216 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 GSX1Q9H4S2 264 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-216ENST00000530004 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 DPM3Q9P2X0 92 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 CELSR1Q9NYQ6 3014 aa11.6□□□□□ -0.55
TTC39A-216ENST00000530004 C15orf61A6NNL5 157 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 IFNA17P01571 189 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 SAA1P0DJI8 122 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 TAS2R30P59541 319 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 KLF17Q5JT82 389 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 ALKAL2Q6UX46 152 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 MS4A7Q9GZW8 240 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 CST7O76096 145 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 IL6RP08887 468 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 IGHV4-38-2P0DP08 117 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 TPT1P13693 172 aaKnown RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 CEACAM3P40198 252 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 HTR2BP41595 481 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 UBE2E1P51965 193 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 TMEM267Q0VDI3 215 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 RPL7L1Q6DKI1 246 aaKnown RBP11.59□□□□□ -0.55
TTC39A-216ENST00000530004 LHFPL4Q7Z7J7 247 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 OR8H3Q8N146 312 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms