RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 TFF3Q07654 80 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 SCN4AP35499 1836 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 PIKFYVEQ9Y2I7 2098 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 NPIPB11E5RHQ5 1161 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 LEPROTL1O95214 131 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 CECR9P0C854 216 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 FAM106AQ4KMX7 169 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 SFRP2Q96HF1 295 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-220ENST00000529526 DCTN5Q9BTE1 182 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 ARID2Q68CP9 1835 aa6.9□□□□□ -1.31
CTNND1-220ENST00000529526 TDRD6O60522 2096 aaKnown RBP6.9□□□□□ -1.31
CTNND1-220ENST00000529526 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 C7orf71A4D174 169 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 PDLIM4P50479 330 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 ZP1P60852 638 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 NHLRC3Q5JS37 347 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 GDF15Q99988 308 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 SCN2AQ99250 2005 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 TRAV30A0A087WSZ9 112 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 GCGP01275 180 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 HLA-DQA1P01909 254 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 MT-ND6P03923 174 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 IL6RP08887 468 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-220ENST00000529526 SCGB1A1P11684 91 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 GCHFRP30047 84 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 ADIPOQQ15848 244 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 EEF1AKMT3Q96AZ1 226 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 GPR82Q96P67 336 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 CENPVQ7Z7K6 275 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-220ENST00000529526 FAM216BQ8N7L0 139 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 CASP8AP2Q9UKL3 1982 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 LOC390937A0A1W2PQ73 354 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 CXorf65A6NEN9 183 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 PLAURQ03405 335 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 ZNF56Q15929 161 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 ELOVL5Q9NYP7 299 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 RAXQ9Y2V3 346 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 A1L4Q6 167 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 MPTX1A8MV57 137 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 C12orf77C9JDV5 145 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 UCP3P55916 312 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 OR13A1Q8NGR1 328 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 LINC00470Q9BZP3 86 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM106BQ9NUM4 274 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 PLXNA1Q9UIW2 1896 aa6.89□□□□□ -1.31
CTNND1-220ENST00000529526 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 MUC21A0A0G2JKD1 596 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 MUC21A0A140T8X8 626 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 C17orf98A8MV24 154 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 B9A039 149 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 TFF1P04155 84 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 SOD3P08294 240 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 NPPCP23582 126 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-220ENST00000529526 MUC21Q5SSG8 566 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 CYP2G1PQ6ZSU1 146 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 VWCEQ96DN2 955 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 NPIPB6E9PJ23 425 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 APOBEC3AP31941 199 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-220ENST00000529526 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 ZNF236Q9UL36 1845 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 A0A087WV48 116 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 MSGN1A6NI15 193 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 STAG3L2P0CL84 134 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 IGHV1-2P23083 117 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 KLRB1Q12918 225 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 LAMTOR1Q6IAA8 161 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 OR10S1Q8NGN2 331 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 TXNDC17Q9BRA2 123 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 NPCDR1Q9BY65 106 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 CKAP5Q14008 2032 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 IGKV1D-33P01593 117 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 IGKV1-33P01594 117 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 IGFBP2P18065 325 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 CGAP01215 116 aa6.88□□□□□ -1.31
CTNND1-220ENST00000529526 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-220ENST00000529526 FOXA2Q9Y261 457 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-220ENST00000529526 TRGV3P03979 118 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
CTNND1-220ENST00000529526 ICAM4Q14773 271 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 BIVMQ86UB2 503 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 OTOFQ9HC10 1997 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 ANKRD36A6QL64 1941 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 IGHV2OR16-5A0A0B4J2B6 119 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 A0A0G2JK05 382 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 RBFOX2O43251 390 aaKnown RBP eCLIP6.87□□□□□ -1.314e-7■■■■□ 19.5
CTNND1-220ENST00000529526 CBLN1P23435 193 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms