RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 SSBP1Q04837 148 aaKnown RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 POU2AF1Q16633 256 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 POC5Q8NA72 575 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 SOSTQ9BQB4 213 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 RSRP1Q9BUV0 290 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TINAGL1Q9GZM7 467 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 C6orf62Q9GZU0 229 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 PLEKHA2Q9HB19 425 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 RABL2BQ9UNT1 228 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 ACTL6BO94805 426 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TRGV3P03979 118 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 CD74P04233 296 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 F2RP25116 425 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TNFSF8P32971 234 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 MAS1LP35410 378 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TAS2R31P59538 309 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 PDLIM3Q53GG5 364 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 RNASE10Q5GAN6 216 aaKnown RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 FOXB2Q5VYV0 432 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TMEM229BQ8NBD8 167 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 MCFD2Q8NI22 146 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 DGCR14Q96DF8 476 aaKnown RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 SPIN2AQ99865 258 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 SPIN2BQ9BPZ2 258 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 E7EUB6 86 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 CTDSPLO15194 276 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 RLN1P04808 185 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 IFNA6P05013 189 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 APELAP0DMC3 54 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 NQO2P16083 231 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 TPPP2P59282 170 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ZNF616Q08AN1 781 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 C10orf55Q5SWW7 151 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 OR4A47Q6IF82 309 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ARRDC1Q8N5I2 433 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ADAD2Q8NCV1 583 aaKnown RBP13.03□□□□□ -0.32
HIF3A-211ENST00000528563 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 PHB2Q99623 299 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 MCRIP2Q9BUT9 160 aaKnown RBP13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ZNF355PQ9NSJ1 428 aa13.03□□□□□ -0.32
HIF3A-211ENST00000528563 ZNF701M0R085 212 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-211ENST00000528563 LGALS1P09382 135 aaKnown RBP13.02□□□□□ -0.33
HIF3A-211ENST00000528563 OR9G9P0C7N8 305 aa13.02□□□□□ -0.33
HIF3A-211ENST00000528563 RAB25P57735 213 aa13.02□□□□□ -0.33
HIF3A-211ENST00000528563 IL18Q14116 193 aa13.02□□□□□ -0.33
HIF3A-211ENST00000528563 OR4D10Q8NGI6 311 aa13.02□□□□□ -0.33
HIF3A-211ENST00000528563 RSL24D1Q9UHA3 163 aaKnown RBP13.02□□□□□ -0.33
HIF3A-211ENST00000528563 A0A1B0GW64 132 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 S1PR2O95136 353 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 IGHV3-11P01762 117 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 PRB2P02812 416 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-211ENST00000528563 LPAR6P43657 344 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 TAS2R19P59542 299 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 RPL8P62917 257 aaKnown RBP13.01□□□□□ -0.33
HIF3A-211ENST00000528563 PHLDA2Q53GA4 152 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 STEAP1BQ6NZ63 245 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 TTC9CQ8N5M4 171 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-211ENST00000528563 COMMD9Q9P000 198 aa13.01□□□□□ -0.33
HIF3A-211ENST00000528563 TRAV3A0A0B4J244 114 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 A0A0G2JLM5 398 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 TEX22C9J3V5 150 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 UPK2O00526 184 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 GSTZ1O43708 216 aaPredicted RBP13□□□□□ -0.33
HIF3A-211ENST00000528563 RAB3DO95716 219 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 OR8U8P0C7N1 319 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 ZNF735P0CB33 412 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 HLA-GP17693 338 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 EGFEM1PQ0D2K5 195 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 CADM3Q8N126 398 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 TERB2Q8NHR7 220 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 DPF1Q92782 380 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 GPR61Q9BZJ8 451 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 HRASLSQ9HDD0 168 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 SLC2A9Q9NRM0 540 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 COA4Q9NYJ1 87 aa13□□□□□ -0.33
HIF3A-211ENST00000528563 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 HMX3A6NHT5 357 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 MPPED1O15442 326 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
HIF3A-211ENST00000528563 HSPB1P04792 205 aaKnown RBP12.99□□□□□ -0.33
HIF3A-211ENST00000528563 FGF2P09038 288 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 S100GP29377 79 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
HIF3A-211ENST00000528563 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 REC114Q7Z4M0 266 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 TBC1D26Q86UD7 250 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 TMEM140Q9NV12 185 aa12.99□□□□□ -0.33
HIF3A-211ENST00000528563 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms