RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 G6PCP35575 357 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 INPP1P49441 399 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 IZUMO4Q1ZYL8 232 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 SSX9Q7RTT3 188 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 NRARPQ7Z6K4 114 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 R3HDM4Q96D70 268 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 BET1LQ9NYM9 111 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 ZNF580Q9UK33 172 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 COL6A5A8TX70 2615 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 G3V318 75 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 ATP6V0E1O15342 81 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 SOX15O60248 233 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 KBTBD11O94819 623 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 OR2A4O95047 310 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 HRASP01112 189 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 KRASP01116 189 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 NQO2P16083 231 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 ANXA7P20073 488 aaKnown RBP8.45□□□□□ -1.06
NEDD8-205ENST00000527046 PPP1R1AQ13522 171 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 KIAA0141Q14154 515 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-205ENST00000527046 ANKRD55Q3KP44 614 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 C9orf152Q5JTZ5 239 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 STPG2Q8N412 459 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 CCDC71LQ8N9Z2 235 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 WFDC12Q8WWY7 111 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 FAM103A1Q9BTL3 118 aaKnown RBP8.45□□□□□ -1.06
NEDD8-205ENST00000527046 ALX4Q9H161 411 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-205ENST00000527046 BEX1Q9HBH7 125 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 KIAA1456Q9P272 454 aa8.45□□□□□ -1.06
NEDD8-205ENST00000527046 C14orf166Q9Y224 244 aaKnown RBP8.45□□□□□ -1.06
NEDD8-205ENST00000527046 A0A0B4J293 547 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 A0A1B0GUS0 222 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 CENPXA8MT69 81 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 SFT2D2O95562 160 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 FXYD3Q14802 87 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 VMA21Q3ZAQ7 101 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 SLC35E3Q7Z769 313 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 TMED4Q7Z7H5 227 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 ZNF329Q86UD4 541 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 POC5Q8NA72 575 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 NSG2Q9Y328 171 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 WSB1Q9Y6I7 421 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 TENM1Q9UKZ4 2725 aa8.44□□□□□ -1.06
NEDD8-205ENST00000527046 TRAV6A0A075B6T7 132 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 C9orf170A2RU37 121 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 RBMXL2O75526 392 aaKnown RBP8.43□□□□□ -1.06
NEDD8-205ENST00000527046 B3GALNT1O75752 331 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 OR4E1P0C645 316 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 VDAC2P45880 294 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-205ENST00000527046 DHRS2Q13268 280 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 LYZL2Q7Z4W2 148 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 SGPP2Q8IWX5 399 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 MMD2Q8IY49 270 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 KLHDC1Q8N7A1 406 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 LRTM2Q8N967 370 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 OR52B4Q8NGK2 314 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 OR4A5Q8NH83 315 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 SGMS2Q8NHU3 365 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 GPR146Q96CH1 333 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 CITED1Q99966 193 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 ZNF747Q9BV97 191 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 C20orf85Q9H1P6 137 aa8.43□□□□□ -1.06
NEDD8-205ENST00000527046 FAM240BA0A1B0GVZ2 78 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 HMX3A6NHT5 357 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 MSGN1A6NI15 193 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 AP4M1O00189 453 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 SERPINE2P07093 398 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 FGF2P09038 288 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 CD28P10747 220 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 S100GP29377 79 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 OR2B8PP59922 312 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 UBE2MP61081 183 aaKnown RBP8.42□□□□□ -1.06
NEDD8-205ENST00000527046 RPL8P62917 257 aaKnown RBP8.42□□□□□ -1.06
NEDD8-205ENST00000527046 CD83Q01151 205 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 CBX3Q13185 183 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 PLGLAQ15195 96 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 TNXAQ16473 311 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 KLK9Q2XQG4 91 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 AKIRIN2Q53H80 203 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM268Q5VZI3 342 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms