RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 SLC2A8Q9NY64 477 aa7.96□□□□□ -1.14
VPS28-204ENST00000526054 TBC1D24Q9ULP9 559 aa7.96□□□□□ -1.14
VPS28-204ENST00000526054 NAP1L6A6NFF2 107 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 SRRM4A7MD48 611 aaKnown RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 ATP6V0E1O15342 81 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 PLA2G10O15496 165 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 LYRM1O43325 122 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 HPRT1P00492 218 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 CA2P00918 260 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 IGF1P05019 195 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 CTSDP07339 412 aaPredicted RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 SAA1P0DJI8 122 aaPredicted RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 VDAC1P21796 283 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 F2RP25116 425 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 RND3P61587 244 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 TRIM16LQ309B1 348 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 DEFB121Q5J5C9 76 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 C11orf87Q6NUJ2 197 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 IDO2Q6ZQW0 420 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 TBC1D26Q86UD7 250 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 PPP1R27Q86WC6 154 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 COMMD1Q8N668 190 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 LINC00482Q8N8I6 264 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 MINDY2Q8NBR6 621 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 OR51S1Q8NGJ8 323 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 OR13C8Q8NGS7 320 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 NOL4LQ96MY1 436 aaPredicted RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 SCGB3A2Q96PL1 93 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 CLCC1Q96S66 551 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 GPR61Q9BZJ8 451 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 TPSG1Q9NRR2 321 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 COMMD9Q9P000 198 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 COPZ2Q9P299 210 aa7.95□□□□□ -1.14
VPS28-204ENST00000526054 C14orf166Q9Y224 244 aaKnown RBP7.95□□□□□ -1.14
VPS28-204ENST00000526054 TNCP24821 2201 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 WI2-2373I1.2A0A1W2PRP0 233 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 RAMP3O60896 148 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ACTL6BO94805 426 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 OR2A4O95047 310 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 CNIH1O95406 144 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 CRYGBP07316 175 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 NQO2P16083 231 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 PIGPP57054 158 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 BRWD1-AS2P59051 145 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 TAS2R31P59538 309 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 KRTAP10-11P60412 298 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ERVK-16P61578 105 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 GNB1P62873 340 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 CX3CL1P78423 397 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 EGFEM1PQ0D2K5 195 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ZNF562Q6V9R5 426 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ETV3LQ6ZN32 361 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ZNF329Q86UD4 541 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 MMD2Q8IY49 270 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ENKURQ8TC29 256 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 MARCH1Q8TCQ1 289 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 ARPC1AQ92747 370 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 RHOVQ96L33 236 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 OR2A7Q96R45 310 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 PLEKHA2Q9HB19 425 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 HRASLSQ9HDD0 168 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 FAM212BQ9NTI7 297 aaPredicted RBP7.94□□□□□ -1.14
VPS28-204ENST00000526054 LINC00527Q9UJ94 153 aa7.94□□□□□ -1.14
VPS28-204ENST00000526054 TRAV41A0A0B4J266 112 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 FAM240BA0A1B0GVZ2 78 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 NUDT19A8MXV4 375 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 FCN1O00602 326 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 MPPED1O15442 326 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 KBTBD11O94819 623 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 S1PR2O95136 353 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 PI3P19957 117 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
VPS28-204ENST00000526054 RPL23AP62750 156 aaKnown RBP7.93□□□□□ -1.14
VPS28-204ENST00000526054 NDPQ00604 133 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 CD69Q07108 199 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 TMEM267Q0VDI3 215 aaPredicted RBP7.93□□□□□ -1.14
VPS28-204ENST00000526054 FXYD3Q14802 87 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 OXA1LQ15070 435 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 TNXAQ16473 311 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 PRSS8Q16651 343 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 TEX38Q6PEX7 206 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 SSX9Q7RTT3 188 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
VPS28-204ENST00000526054 PUSL1Q8N0Z8 303 aaKnown RBP7.93□□□□□ -1.14
VPS28-204ENST00000526054 DMBX1Q8NFW5 382 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 OR4A5Q8NH83 315 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 GRPEL2Q8TAA5 225 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
VPS28-204ENST00000526054 H0Y980 276 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 B3GALNT1O75752 331 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 SERPINE2P07093 398 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 MAS1LP35410 378 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 LPAR6P43657 344 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 POU2AF1Q16633 256 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 CXorf66Q5JRM2 361 aaPredicted RBP7.92□□□□□ -1.14
VPS28-204ENST00000526054 OR4A47Q6IF82 309 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms