RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 EGR2P11161 476 aaPredicted RBP9.73□□□□□ -0.85
CCS-202ENST00000525435 PI3P19957 117 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 CFHR3Q02985 330 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 PJVKQ0ZLH3 352 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 FOXE3Q13461 319 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 ZNF846Q147U1 533 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 ARPC1AQ92747 370 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 R3HDM4Q96D70 268 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 CLCC1Q96S66 551 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 ZNF430Q9H8G1 570 aaPredicted RBP9.73□□□□□ -0.85
CCS-202ENST00000525435 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 ZFP57Q9NU63 452 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 KCNIP3Q9Y2W7 256 aa9.73□□□□□ -0.85
CCS-202ENST00000525435 TEX13DA0A0J9YY54 714 aaPredicted RBP9.72□□□□□ -0.85
CCS-202ENST00000525435 MARCH11A6NNE9 402 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 ARPC1BO15143 372 aaKnown RBP9.72□□□□□ -0.85
CCS-202ENST00000525435 BRI3O95415 125 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 UCP1P25874 307 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
CCS-202ENST00000525435 SLC6A1P30531 599 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 RPL8P62917 257 aaKnown RBP9.72□□□□□ -0.85
CCS-202ENST00000525435 DHODHQ02127 395 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 OR4A47Q6IF82 309 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 NDUFA11Q86Y39 141 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 VKORC1L1Q8N0U8 176 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 DMBX1Q8NFW5 382 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 GALNT14Q96FL9 552 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 TSC22D3Q99576 134 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 SPIN2AQ99865 258 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 SPIN2BQ9BPZ2 258 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 TPSG1Q9NRR2 321 aa9.72□□□□□ -0.85
CCS-202ENST00000525435 TNCP24821 2201 aa9.71□□□□□ -0.85
CCS-202ENST00000525435 TCRBV4S1A1TA0A5B7 111 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 CRYM-AS1A6NIL9 109 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 M0QZ24 198 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 UPK2O00526 184 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 S1PR2O95136 353 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 CDS2O95674 445 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 KRASP01116 189 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 IGLV1-40P01703 118 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 CD28P10747 220 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 NDPQ00604 133 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 SRSF4Q08170 494 aaKnown RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 RBMS2Q15434 407 aaKnown RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 TCTEX1D4Q5JR98 221 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 ZNF329Q86UD4 541 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 TP53RKQ96S44 253 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 TMEM222Q9H0R3 208 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 TMEM140Q9NV12 185 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 LINC00527Q9UJ94 153 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 VSIG4Q9Y279 399 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 TSSC4Q9Y5U2 329 aaPredicted RBP9.71□□□□□ -0.86
CCS-202ENST00000525435 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 FBN3Q75N90 2809 aa9.71□□□□□ -0.86
CCS-202ENST00000525435 PLXNB1O43157 2135 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 MSGN1A6NI15 193 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 G3V318 75 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 H3BUA1 57 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 PLA2G10O15496 165 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 SNAPC5O75971 98 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 HLA-GP17693 338 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 PSMB8P28062 276 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 UBE2MP61081 183 aaKnown RBP9.7□□□□□ -0.86
CCS-202ENST00000525435 GNB1P62873 340 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 TNXAQ16473 311 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 SSX9Q7RTT3 188 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 LFNGQ8NES3 379 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 GRPEL2Q8TAA5 225 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 ABHD5Q8WTS1 349 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 GLYATL2Q8WU03 294 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
CCS-202ENST00000525435 IL22RA2Q969J5 263 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 SEC22AQ96IW7 307 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
CCS-202ENST00000525435 PRNDQ9UKY0 176 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 FBXO7Q9Y3I1 522 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
CCS-202ENST00000525435 ANK2Q01484 3957 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 NDUFB6O95139 128 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 ANXA3P12429 323 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 G6PCP35575 357 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 CDX1P47902 265 aaPredicted RBP9.69□□□□□ -0.86
CCS-202ENST00000525435 SRPXP78539 464 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 C2orf68Q2NKX9 166 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 TRIM16LQ309B1 348 aa9.69□□□□□ -0.86
CCS-202ENST00000525435 THOC7Q6I9Y2 204 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms