RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 KBTBD11O94819 623 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 CD36P16671 472 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 RAB6AP20340 208 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 NFYAP23511 347 aaPredicted RBP17.92■□□□□ 0.46
USP47-205ENST00000525257 UXS1Q8NBZ7 420 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 FANCD2OSQ96PS1 177 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 ST6GALNAC5Q9BVH7 336 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 DUSP21Q9H596 190 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 OR2W1Q9Y3N9 320 aa17.92■□□□□ 0.46
USP47-205ENST00000525257 LOC102724200A0A096LPH7 203 aaPredicted RBP17.91■□□□□ 0.46
USP47-205ENST00000525257 A0A1B0GW64 132 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 IFITM5A6NNB3 132 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 PDCD5O14737 125 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 AREGP15514 252 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 MAP2K4P45985 399 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 FAM106AQ4KMX7 169 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 BTNL8Q6UX41 500 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 OR2A7Q96R45 310 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 SLC2A9Q9NRM0 540 aa17.91■□□□□ 0.46
USP47-205ENST00000525257 METTL21EPA6NDL7 271 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 ERICH4A6NGS2 130 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 A8MWP6 167 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 IGLV2-14P01704 120 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 HLA-DQB1P01920 261 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 DTYMKP23919 212 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 OR4S2Q8NH73 311 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 VSTM2AQ8TAG5 236 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 TMEM167AQ8TBQ9 72 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 TCTEX1D2Q8WW35 142 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 EEF1AKMT3Q96AZ1 226 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 ATG5Q9H1Y0 275 aa17.9■□□□□ 0.46
USP47-205ENST00000525257 IGKV1D-13A0A0B4J2D9 117 aa17.89■□□□□ 0.45
USP47-205ENST00000525257 ZNF735P0CB33 412 aa17.89■□□□□ 0.45
USP47-205ENST00000525257 IGKV1-13P0DP09 117 aa17.89■□□□□ 0.45
USP47-205ENST00000525257 PSMB6P28072 239 aa17.89■□□□□ 0.45
USP47-205ENST00000525257 PUSL1Q8N0Z8 303 aaKnown RBP17.89■□□□□ 0.45
USP47-205ENST00000525257 SPATA2Q9UM82 520 aa17.89■□□□□ 0.45
USP47-205ENST00000525257 TRAV1-2A0A0B4J238 106 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 A0A0J9YWU9 116 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 DHFRP00374 187 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 REG1AP05451 166 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 CRYGCP07315 174 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 MYOD1P15172 320 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 CRHBPP24387 322 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 MAS1LP35410 378 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 ANKRD55Q3KP44 614 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 TM4SF20Q53R12 229 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 OR4A47Q6IF82 309 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 SSX9Q7RTT3 188 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 KMT2AQ03164 3969 aa17.88■□□□□ 0.45
USP47-205ENST00000525257 MFSD2BA6NFX1 497 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 SLC22A5O76082 557 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 CTXN2P0C2S0 81 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 MYL9P24844 172 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 AQP4P55087 323 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 EWSR1Q01844 656 aaKnown RBP eCLIP17.87■□□□□ 0.45
USP47-205ENST00000525257 CDNFQ49AH0 187 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 PRSS48Q7RTY5 328 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 HSD17B10Q99714 261 aaKnown RBP17.87■□□□□ 0.45
USP47-205ENST00000525257 TAS2R8Q9NYW2 309 aa17.87■□□□□ 0.45
USP47-205ENST00000525257 NUPR2A6NF83 97 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 DEFA4P12838 97 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 CTRB1P17538 263 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 RAB3BP20337 219 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 BRWD1-AS2P59051 145 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 SSX1Q16384 188 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 CTRB2Q6GPI1 263 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 UNQ9165/PRO28630Q6UXU0 137 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 GPHA2Q96T91 129 aa17.86■□□□□ 0.45
USP47-205ENST00000525257 HIST1H1BP16401 226 aaKnown RBP17.85■□□□□ 0.45
USP47-205ENST00000525257 EIF4EBP1Q13541 118 aaPredicted RBP17.85■□□□□ 0.45
USP47-205ENST00000525257 ARL6IP1Q15041 203 aa17.85■□□□□ 0.45
USP47-205ENST00000525257 RBPMS2Q6ZRY4 209 aaKnown RBP17.85■□□□□ 0.45
USP47-205ENST00000525257 MFSD4AQ8N468 514 aa17.85■□□□□ 0.45
USP47-205ENST00000525257 OR1L6Q8NGR2 347 aa17.85■□□□□ 0.45
USP47-205ENST00000525257 NUDCD2Q8WVJ2 157 aa17.85■□□□□ 0.45
USP47-205ENST00000525257 KRTAP17-1Q9BYP8 105 aa17.85■□□□□ 0.45
USP47-205ENST00000525257 IGLV11-55A0A075B6I3 123 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 SMIM30A4D0T7 59 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 CLEC3BP05452 202 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 RPL8P62917 257 aaKnown RBP17.84■□□□□ 0.45
USP47-205ENST00000525257 KLK9Q2XQG4 91 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 ZNF585BQ52M93 769 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 HACD4Q5VWC8 232 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 LYG2Q86SG7 212 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 KLK9Q9UKQ9 250 aa17.84■□□□□ 0.45
USP47-205ENST00000525257 DNAH10Q8IVF4 4471 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 TRBV7-1A0A0A6YYK4 115 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 TRAV25A0A0B4J276 109 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 IGHV3-35A0A0C4DH35 117 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 HRASP01112 189 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 HLA-GP17693 338 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 GPR183P32249 361 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 DEFB135Q30KP9 77 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 CNIH2Q6PI25 160 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 NR2C2APQ86WQ0 139 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 MARC2Q969Z3 335 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 CXorf58Q96LI9 332 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 DCSTAMPQ9H295 470 aa17.83■□□□□ 0.44
USP47-205ENST00000525257 TMEM235A6NFC5 223 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms