RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 WNT4P56705 351 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 EDDM3BP56851 147 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SYNJ2BPP57105 145 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TAS2R41P59536 307 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 NUTF2P61970 127 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 RPS27AP62979 156 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 CXCL6P80162 114 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TRAM2Q15035 370 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DUSP7Q16829 419 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 MPV17LQ2QL34 196 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 DEFB135Q30KP9 77 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF829Q3KNS6 432 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 LBHQ53QV2 105 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 C9orf152Q5JTZ5 239 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 KRBOX4Q5JUW0 171 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 C6orf183Q5T699 404 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OGFRL1Q5TC84 451 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 SPATA31B1PQ5VZV4 182 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CTRB2Q6GPI1 263 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 Q6P435 159 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 C16orf54Q6UWD8 224 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF705AQ6ZN79 300 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 RPS27LQ71UM5 84 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 DCXRQ7Z4W1 244 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 GPR141Q7Z602 305 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SPATA12Q7Z6I5 190 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ARPINQ7Z6K5 226 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CYP4Z1Q86W10 505 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PDPNQ86YL7 162 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TMEM61Q8N0U2 210 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 C10orf126Q8N4M7 172 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TTC9CQ8N5M4 171 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CCNYL1Q8N7R7 359 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ASCC1Q8N9N2 400 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 HSD17B11Q8NBQ5 300 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 C19orf18Q8NEA5 215 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SPATA4Q8NEY3 305 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 BBS1Q8NFJ9 593 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 GPR32P1Q8NGA4 272 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OR52B4Q8NGK2 314 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OR4A5Q8NH83 315 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OR1L1Q8NH94 360 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OTOSQ8NHW6 89 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PCNPQ8WW12 178 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 GIMAP1Q8WWP7 306 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 LZICQ8WZA0 190 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 RPL3LQ92901 407 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 PTX4Q96A99 478 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SLAMF6Q96DU3 332 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 MRPS24Q96EL2 167 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 OR10C1Q96KK4 312 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CXorf58Q96LI9 332 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 YPEL2Q96QA6 119 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 OR2A7Q96R45 310 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 FMO2Q99518 471 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TSNAXQ99598 290 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 SPIN2AQ99865 258 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SPIN2BQ9BPZ2 258 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF251Q9BRH9 671 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 SCRT1Q9BWW7 348 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF436Q9C0F3 470 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 FGF23Q9GZV9 251 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 REEP1Q9H902 201 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 RETNQ9HD89 108 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 HMG20AQ9NP66 347 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 EXOSC4Q9NPD3 245 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 DAZ1Q9NQZ3 744 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 MRPL22Q9NWU5 206 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 FAM206AQ9NX38 181 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 CALYQ9NYX4 217 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IL20Q9NYY1 176 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 IDI2-AS1Q9NZ38 188 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 NINJ2Q9NZG7 142 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 PIPOXQ9P0Z9 390 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ENOPH1Q9UHY7 261 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF230Q9UIE0 474 aaPredicted RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 SAMD4AQ9UPU9 718 aaKnown RBP0.98□□□□□ -2.25
CD44-212ENST00000524922 PSG11Q9UQ72 335 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 ZNF257Q9Y2Q1 563 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 V9GYS6 101 aa0.98□□□□□ -2.25
CD44-212ENST00000524922 TRBV6-6A0A0A6YYG2 114 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TRAV5A0A0B4J249 113 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 A0A1B0GTI1 187 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CPSF4LA6NMK7 179 aaKnown RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 BBIP1A8MTZ0 92 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ZNF705FA8MVS1 300 aaPredicted RBP0.97□□□□□ -2.25
CD44-212ENST00000524922 H0YJW9 148 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 C15orf65H3BRN8 121 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 M0QX08 132 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 DCTN6O00399 190 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 NDUFA4O00483 81 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CDC42EP2O14613 210 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 RAB29O14966 203 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 CYB5BO43169 146 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 RIPK2O43353 540 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 TPST1O60507 370 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 GPX5O75715 221 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 SULT1C4O75897 302 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 MMP23AO75900 390 aa0.97□□□□□ -2.25
CD44-212ENST00000524922 ANP32DO95626 131 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms