RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 TRGV3P03979 118 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 SLURP1P55000 103 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 UBE2KP61086 200 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 VMA21Q3ZAQ7 101 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 NOXA1Q86UR1 476 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 HOGA1Q86XE5 327 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 OR5T1Q8NG75 326 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 AUNIPQ9H7T9 357 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
TRAPPC4-204ENST00000524797 H3BUA1 57 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 OVOL1O14753 267 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 SLC22A5O76082 557 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 IGLV2-14P01704 120 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 IL7P13232 177 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 ECI1P42126 302 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 RPL30P62888 115 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 EIF4EBP1Q13541 118 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 GVQW1Q8N7I0 195 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 OSR1Q8TAX0 266 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 PRR25Q96S07 402 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 FCGR3BO75015 233 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 HSPB1P04792 205 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 RPS19P39019 145 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 PRSS8Q16651 343 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 IDO2Q6ZQW0 420 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 KCTD9Q7L273 389 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 CCDC190Q86UF4 302 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 BEST4Q8NFU0 473 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 DLX4Q92988 240 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 TMEM68Q96MH6 324 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF355PQ9NSJ1 428 aa8.62□□□□□ -1.03
TRAPPC4-204ENST00000524797 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 PTHLHP12272 177 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 AADACP22760 399 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 HTR2BP41595 481 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 OR2B11Q5JQS5 317 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 OVCH2Q7RTZ1 564 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 HSD17B10Q99714 261 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 MRPS7Q9Y2R9 242 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 PRELID3BQ9Y3B1 194 aa8.61□□□□□ -1.03
TRAPPC4-204ENST00000524797 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 BRI3O95415 125 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 FCGR2CP31995 323 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 INSL3P51460 131 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 TNXAQ16473 311 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 UBE2NLQ5JXB2 153 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 NRARPQ7Z6K4 114 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 PHB2Q99623 299 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 B9D2Q9BPU9 175 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 TINAGL1Q9GZM7 467 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 MSGN1A6NI15 193 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 XRCC3O43542 346 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 AP2S1P53680 142 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 S100A12P80511 92 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 MSMO1Q15800 293 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 SRSF12Q8WXF0 261 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 SNAPC3Q92966 411 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 CCL28Q9NRJ3 127 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF256Q9Y2P7 627 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-204ENST00000524797 MEIS3P1A6NDR6 274 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 FCER2P06734 321 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 APELAP0DMC3 54 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 RELQ04864 619 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 CD69Q07108 199 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF66Q6ZN08 573 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZNF429Q86V71 674 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 MMD2Q8IY49 270 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ADAD2Q8NCV1 583 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ZFAND1Q8TCF1 268 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 SECTM1Q8WVN6 248 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ACOT12Q8WYK0 555 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 S100A16Q96FQ6 103 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 GPHA2Q96T91 129 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 COA4Q9NYJ1 87 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 TAS2R8Q9NYW2 309 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 ANAPC10Q9UM13 185 aa8.59□□□□□ -1.03
TRAPPC4-204ENST00000524797 SORL1Q92673 2214 aa8.59□□□□□ -1.04
TRAPPC4-204ENST00000524797 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 CREBL2O60519 120 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 SAP30O75446 220 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 PPYP01298 95 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 KIR2DS2P43631 304 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 TAS2R20P59543 309 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 POLR2GP62487 172 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 DEFA5Q01523 94 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 C11orf87Q6NUJ2 197 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 ACSM6Q6P461 480 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 SAMD12Q8N8I0 201 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR5AP2Q8NGF4 316 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms