RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 RBKSQ9H477 322 aa6.51□□□□□ -1.37
SPIDR-223ENST00000524033 MANBALQ9NQG1 85 aa6.51□□□□□ -1.37
SPIDR-223ENST00000524033 HSPB7Q9UBY9 170 aa6.51□□□□□ -1.37
SPIDR-223ENST00000524033 ITPR3Q14573 2671 aa6.51□□□□□ -1.37
SPIDR-223ENST00000524033 ZGRF1Q86YA3 2104 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 UBE2L5PA0A1B0GUS4 154 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 A0A1W2PR80 420 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 A6NNC1 897 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 A8MWP6 167 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 HSPB6O14558 160 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 ZNF737O75373 536 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 VENTXO95231 258 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 GCGP01275 180 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 SELLP14151 372 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 CD99P14209 185 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 ARR3P36575 388 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 WNT5AP41221 380 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 CLDN18P56856 261 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
SPIDR-223ENST00000524033 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
SPIDR-223ENST00000524033 MEF2BQ02080 365 aaPredicted RBP6.5□□□□□ -1.37
SPIDR-223ENST00000524033 TNFRSF9Q07011 255 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 SSX2Q16385 188 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 Q3ZCU0 254 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 FBXL19-AS1Q494R0 122 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 TMEM144Q7Z5S9 345 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 WDR86Q86TI4 376 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 DRAM1Q8N682 238 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 Q8N7P7 452 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 ZBTB34Q8NCN2 500 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 NINJ1Q92982 152 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 LHX4Q969G2 390 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 ZNF488Q96MN9 340 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 FOXC2Q99958 501 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 PARLQ9H300 379 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 PRO1933Q9H354 126 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 PRSS50Q9UI38 385 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 GAB2Q9UQC2 676 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 MTORP42345 2549 aa6.5□□□□□ -1.37
SPIDR-223ENST00000524033 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 C5orf49A4QMS7 147 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MBD3L4A6NDZ8 208 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MBD3L3A6NE82 208 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MBD3L5A6NJ08 208 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 RNF212BA8MTL3 300 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 H7BYZ3 331 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MRPL33O75394 65 aaKnown RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 RHBDL1O75783 438 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 NGFP01138 241 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MBP02144 154 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 GYPAP02724 150 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 NDUFB7P17568 137 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 GALR1P47211 349 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 RPL11P62913 178 aaKnown RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 P2RY6Q15077 328 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 ADIRFQ15847 76 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 AARDQ4LEZ3 155 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 SSX9Q7RTT3 188 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 ZNF664Q8N3J9 261 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 C17orf78Q8N4C9 275 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 MBD3L2Q8NHZ7 208 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 LINC01560Q8TB33 94 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 RDH5Q92781 318 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 NEIL1Q96FI4 390 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-223ENST00000524033 HIST1H2AAQ96QV6 131 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 ELOVL1Q9BW60 279 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 CHODLQ9H9P2 273 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 SLC39A9Q9NUM3 307 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 OR6C3Q9NZP0 311 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 JKAMPQ9P055 326 aa6.49□□□□□ -1.37
SPIDR-223ENST00000524033 ANKRD30BLA7E2S9 258 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 RAB29O14966 203 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 OR2H2O95918 312 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 CCL2P13500 99 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 NPPCP23582 126 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 KIR2DL2P43627 348 aaPredicted RBP6.48□□□□□ -1.37
SPIDR-223ENST00000524033 PSMB3P49720 205 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 SPCS3P61009 180 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 ERVS71-1P61550 626 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 LCN2P80188 198 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 FOXF2Q12947 444 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 ZNF146Q15072 292 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 ACOT6Q3I5F7 207 aaPredicted RBP6.48□□□□□ -1.37
SPIDR-223ENST00000524033 TUSC5Q8IXB3 177 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 Q8IYB0 196 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 ZNF645Q8N7E2 425 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 TCTEX1D1Q8N7M0 179 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 OR1K1Q8NGR3 316 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 C1orf159Q96HA4 380 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 IMMP2LQ96T52 175 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 PCGF1Q9BSM1 259 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 SFXN3Q9BWM7 321 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms