RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 MYOZ3Q8TDC0 251 aa9.78□□□□□ -0.84
CCNC-216ENST00000523961 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
CCNC-216ENST00000523961 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
CCNC-216ENST00000523961 FAM212BQ9NTI7 297 aaPredicted RBP9.78□□□□□ -0.84
CCNC-216ENST00000523961 COMMD9Q9P000 198 aa9.78□□□□□ -0.84
CCNC-216ENST00000523961 PKD1L1Q8TDX9 2849 aa9.78□□□□□ -0.84
CCNC-216ENST00000523961 VWFP04275 2813 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 TNCP24821 2201 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ANKRD20A5PA0PJZ0 165 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 MSGN1A6NI15 193 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 SOX15O60248 233 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ZNF735P0CB33 412 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 MAS1LP35410 378 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ETV6P41212 452 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ECI1P42126 302 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ERVK-16P61578 105 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 RND3P61587 244 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 PYDC2Q56P42 97 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 C18orf65Q6ZTR6 163 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 TBC1D26Q86UD7 250 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 CCDC190Q86UF4 302 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ZNF491Q8N8L2 437 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 OR4C16Q8NGL9 310 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 ZFAND1Q8TCF1 268 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 SRSF12Q8WXF0 261 aaKnown RBP9.77□□□□□ -0.85
CCNC-216ENST00000523961 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 PHB2Q99623 299 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 SPIN2AQ99865 258 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 SPIN2BQ9BPZ2 258 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 THAP7Q9BT49 309 aaPredicted RBP9.77□□□□□ -0.85
CCNC-216ENST00000523961 SLC2A9Q9NRM0 540 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 VSIG4Q9Y279 399 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 V9GYH0 126 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 TRRAPQ9Y4A5 3859 aa9.77□□□□□ -0.85
CCNC-216ENST00000523961 H3BUA1 57 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 S1PR2O95136 353 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 MYCNOSP40205 109 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 LPAR6P43657 344 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 PPP5CP53041 499 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 RPL8P62917 257 aaKnown RBP9.76□□□□□ -0.85
CCNC-216ENST00000523961 ZNF585BQ52M93 769 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 FOXB2Q5VYV0 432 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 FAAP20Q6NZ36 180 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 Q8N402 240 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 DMBX1Q8NFW5 382 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 OR6Q1Q8NGQ2 317 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 C4orf3Q8WVX3 66 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 PRRT1Q99946 306 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 SLA2Q9H6Q3 261 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 HRASLSQ9HDD0 168 aa9.76□□□□□ -0.85
CCNC-216ENST00000523961 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 CCL24O00175 119 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 MPPED1O15442 326 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 PI3P19957 117 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 CD33P20138 364 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 RPL27AP46776 148 aaKnown RBP9.75□□□□□ -0.85
CCNC-216ENST00000523961 PIGPP57054 158 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 AP3S2P59780 193 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
CCNC-216ENST00000523961 SURF2Q15527 256 aaPredicted RBP9.75□□□□□ -0.85
CCNC-216ENST00000523961 ZNF79Q15937 498 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 ASPHD1Q5U4P2 390 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 ETV3LQ6ZN32 361 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 CADM3Q8N126 398 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 CCDC71LQ8N9Z2 235 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 OR5T1Q8NG75 326 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 OR13C8Q8NGS7 320 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 COPZ2Q9P299 210 aa9.75□□□□□ -0.85
CCNC-216ENST00000523961 MARCH11A6NNE9 402 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 UPK2O00526 184 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 BRI3O95415 125 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 KRASP01116 189 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 TRGV3P03979 118 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
CCNC-216ENST00000523961 IL6RP08887 468 aaPredicted RBP9.74□□□□□ -0.85
CCNC-216ENST00000523961 FGF2P09038 288 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 OR9G9P0C7N8 305 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 HLA-GP17693 338 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 FAUP35544 74 aaKnown RBP9.74□□□□□ -0.85
CCNC-216ENST00000523961 TPPP2P59282 170 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 RUNX1Q01196 453 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 SLC25A42Q86VD7 318 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 TOMM5Q8N4H5 51 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 OR51S1Q8NGJ8 323 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 MARCH1Q8TCQ1 289 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 CASTOR1Q8WTX7 329 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 MS4A10Q96PG2 267 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 P2RX4Q99571 388 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 GNB4Q9HAV0 340 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 SLC2A8Q9NY64 477 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms