RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PSMD7P51665 324 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
SDCBP-211ENST00000523441 LAMTOR1Q6IAA8 161 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 SSX9Q7RTT3 188 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 TMEM80Q96HE8 168 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 PECRQ9BY49 303 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 C6orf62Q9GZU0 229 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-211ENST00000523441 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 IGHV3-49A0A0A0MS15 119 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 TRBV6-6A0A0A6YYG2 114 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 CA1P00915 261 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-211ENST00000523441 CTSDP07339 412 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-211ENST00000523441 TPBGQ13641 420 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF645Q8N7E2 425 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 OSR1Q8TAX0 266 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-211ENST00000523441 URM1Q9BTM9 101 aaKnown RBP8.52□□□□□ -1.05
SDCBP-211ENST00000523441 PLGRKTQ9HBL7 147 aa8.52□□□□□ -1.05
SDCBP-211ENST00000523441 DIMT1Q9UNQ2 313 aaKnown RBP8.52□□□□□ -1.05
SDCBP-211ENST00000523441 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 A0A1B0GW64 132 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 OR2T8A6NH00 312 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 NPIPB5A8MRT5 1133 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 TMEM14DPA8MWL7 114 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 TSPAN4O14817 238 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 DHFRP00374 187 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 C8orf88P0DMB2 117 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 MAPK3P27361 379 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-211ENST00000523441 PSMB6P28072 239 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 TMEM50BP56557 158 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 CLDN12P56749 244 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 QRFPP83859 136 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 ACSM3Q53FZ2 586 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF767PQ75MW2 155 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 KCTD9Q7L273 389 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 LRRTM1Q86UE6 522 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 GBGT1Q8N5D6 347 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 SETD9Q8NE22 299 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 OR4A4PQ8NGN8 299 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 ADTRPQ96IZ2 230 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 CHRDL1Q9BU40 450 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 OR51E2Q9H255 320 aa8.51□□□□□ -1.05
SDCBP-211ENST00000523441 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
SDCBP-211ENST00000523441 HSPG2P98160 4391 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 MYL12BO14950 172 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 BPNT1O95861 308 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 HLA-DMBP28068 263 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 SERPINB10P48595 397 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 TCTAP57738 103 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 TAS2R43P59537 309 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 PLAC9Q5JTB6 97 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 C1orf100Q5SVJ3 147 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 Q6ZTC4 211 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 CENPSQ8N2Z9 138 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF555Q8NEP9 628 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 SLC2A9Q9NRM0 540 aa8.5□□□□□ -1.05
SDCBP-211ENST00000523441 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 TRBV6-7A0A0A0MS04 114 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 ATP8B1O43520 1251 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 KBTBD11O94819 623 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 RPL30P62888 115 aaKnown RBP8.49□□□□□ -1.05
SDCBP-211ENST00000523441 ST3GAL4Q11206 333 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 TMEM187Q14656 261 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 TTC23Q5W5X9 447 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 UBAC2Q8NBM4 344 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF485Q8NCK3 441 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 TMEM190Q8WZ59 177 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 CXorf58Q96LI9 332 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 OR2A7Q96R45 310 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 GPHA2Q96T91 129 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 C9orf16Q9BUW7 83 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 SPATA2Q9UM82 520 aa8.49□□□□□ -1.05
SDCBP-211ENST00000523441 MRPS7Q9Y2R9 242 aaKnown RBP8.49□□□□□ -1.05
SDCBP-211ENST00000523441 IGLV11-55A0A075B6I3 123 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 C11orf94C9JXX5 98 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 TGOLN2O43493 480 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 FCGR3AP08637 254 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF735P0CB33 412 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 HIST1H1BP16401 226 aaKnown RBP8.48□□□□□ -1.05
SDCBP-211ENST00000523441 GALP22466 123 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-211ENST00000523441 PLA2G7Q13093 441 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 HSD17B12Q53GQ0 312 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 LEMD1Q68G75 181 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 NR2C2APQ86WQ0 139 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 TCTEX1D2Q8WW35 142 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 CYGBQ8WWM9 190 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 GIMAP1Q8WWP7 306 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 CABLES2Q9BTV7 478 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 DAZ1Q9NQZ3 744 aaKnown RBP8.48□□□□□ -1.05
SDCBP-211ENST00000523441 HSF4Q9ULV5 492 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms