RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 TNFRSF14Q92956 283 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 MARC2Q969Z3 335 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 AIFM2Q9BRQ8 373 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 QTRT1Q9BXR0 403 aaKnown RBP5.59□□□□□ -1.51
CSMD1-211ENST00000523062 MRPL20Q9BYC9 149 aaKnown RBP5.59□□□□□ -1.51
CSMD1-211ENST00000523062 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 PARP11Q9NR21 331 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 MMP26Q9NRE1 261 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 TMEM140Q9NV12 185 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 NUP50Q9UKX7 468 aa5.59□□□□□ -1.51
CSMD1-211ENST00000523062 ACACBO00763 2458 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 KMT2BQ9UMN6 2715 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PPIAL4CA0A0B4J2A2 164 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 hCG_1809904A0A1W2PP81 198 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 A0A1W2PPE2 198 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 A0A1W2PPR1 153 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 A0A1W2PR64 198 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 A0A1W2PRV1 198 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 UMAD1C9J7I0 102 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 KRBOX1C9JBD0 128 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TEX46H3BTG2 121 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TRIM77I1YAP6 450 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 C19orf84I3L1E1 186 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 IFNA17P01571 189 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 METTL15P1P0C7V9 234 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 CT45A6P0DMU7 189 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 CT45A5P0DMU8 189 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 CT45A7P0DMV0 189 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PPIAL4GP0DN37 164 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ATP6V0CP27449 155 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 CAMLGP49069 296 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ZNF137PP52743 207 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 F2RL1P55085 397 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 OR2B8PP59922 312 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 SLC38A11Q08AI6 406 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PJVKQ0ZLH3 352 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ATP6V1FQ16864 119 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PDLIM3Q53GG5 364 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 WDR25Q64LD2 544 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM182Q6ZP80 229 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 Q6ZRG5 221 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ZNF429Q86V71 674 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ABHD12Q8N2K0 398 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ZNF525Q8N782 197 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 OR13D1Q8NGV5 346 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 OR2G3Q8NGZ4 309 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 SCGB1C1Q8TD33 95 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM186Q96B77 213 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PINX1Q96BK5 328 aaKnown RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 RHOVQ96L33 236 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 OR4C12Q96R67 309 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PCGF1Q9BSM1 259 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 SH3BGRL3Q9H299 93 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM133Q9H2Q1 129 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 HRH4Q9H3N8 390 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PATZ1Q9HBE1 687 aaKnown RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 ZNRD1Q9P1U0 126 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 PRNDQ9UKY0 176 aa5.58□□□□□ -1.52
CSMD1-211ENST00000523062 FOXA2Q9Y261 457 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 SPTBN1Q01082 2364 aaKnown RBP5.58□□□□□ -1.52
CSMD1-211ENST00000523062 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 IGHV2-26A0A0B4J1V2 119 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 H0YJW9 148 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 LY6HO94772 140 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 PRH1P02810 166 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ARG1P05089 322 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 LIPFP07098 398 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 OR8U8P0C7N1 319 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 GPR6P46095 362 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-211ENST00000523062 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-211ENST00000523062 RAB13P51153 203 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 EFNA4P52798 201 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 PRRX1P54821 245 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ERVFRD-1P60508 538 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 GNB2P62879 340 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ZNF616Q08AN1 781 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ARL16Q0P5N6 197 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 AKR1C8PQ5T2L2 129 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 OR8G2PQ6IF36 304 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 OR4A47Q6IF82 309 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 BTNL8Q6UX41 500 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 DPPA3Q6W0C5 159 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 HAPLN4Q86UW8 402 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 PDPNQ86YL7 162 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 TGIF2LXQ8IUE1 241 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 CCDC28AQ8IWP9 274 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 VKORC1L1Q8N0U8 176 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 COMMD1Q8N668 190 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 LY6G5BQ8NDX9 201 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 OR5AN1Q8NGI8 311 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 OSR1Q8TAX0 266 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-211ENST00000523062 FAM213BQ8TBF2 198 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ST6GALNAC6Q969X2 333 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 HARBI1Q96MB7 349 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 NABP2Q9BQ15 211 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms