RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RRHO14718 337 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 MED6O75586 246 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 ACTL6BO94805 426 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NDUFA3O95167 84 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 LY6G6DO95868 133 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 IGLV2-23P01705 113 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 FGF2P09038 288 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 CNTFRP26992 372 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NKX2-1P43699 371 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 RPL8P62917 257 aaKnown RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 RELBQ01201 579 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 RAB32Q13637 225 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 EBI3Q14213 229 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 ZFP69Q49AA0 526 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 MMD2Q8IY49 270 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 BCL6BQ8N143 479 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 Q8N6K4 173 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NPBQ8NG41 125 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 OR5R1Q8NH85 324 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 TMEM167AQ8TBQ9 72 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 PPP1R1CQ8WVI7 109 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 RBMXL1Q96E39 390 aaKnown RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 FYTTD1Q96QD9 318 aaKnown RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 CLCC1Q96S66 551 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NEURL2Q9BR09 285 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 TMUB1Q9BVT8 246 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 TCF19Q9Y242 345 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NSG2Q9Y328 171 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 MOB4Q9Y3A3 225 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 LSM5Q9Y4Y9 91 aaKnown RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 SOX21Q9Y651 276 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-208ENST00000520561 POMT1Q9Y6A1 747 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 ABCA1O95477 2261 aa7.17□□□□□ -1.26
CSMD1-208ENST00000520561 NOTCH2Q04721 2471 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 NCBP2LA6PVI3 153 aaKnown RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 K7EPK0 472 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 ST8SIA3O43173 380 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 PITX3O75364 302 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 OR2F2O95006 317 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 NXPH3O95157 252 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 IFNA17P01571 189 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 RLN2P04090 185 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 PSMB6P28072 239 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 PRSS8Q16651 343 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 RBMS3Q6XE24 437 aaKnown RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 Q6ZRM9 215 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 C16orf82Q7Z2V1 217 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 ZNF429Q86V71 674 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 FAM71E2Q8N5Q1 922 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 THAP6Q8TBB0 222 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 RITA1Q96K30 269 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 SMR3AQ99954 134 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 SLC25A33Q9BSK2 321 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 FBXL15Q9H469 300 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 ENY2Q9NPA8 101 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 TPSG1Q9NRR2 321 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 FKBP11Q9NYL4 201 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 CDC42EP3Q9UKI2 254 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 RCL1Q9Y2P8 373 aaKnown RBP7.16□□□□□ -1.26
CSMD1-208ENST00000520561 SIGLEC9Q9Y336 463 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 OR51B2Q9Y5P1 312 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 ITPR2Q14571 2701 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 MYO9AB2RTY4 2548 aa7.16□□□□□ -1.26
CSMD1-208ENST00000520561 FXYD6-FXYD2A0A087WZ82 144 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 A6NDX4 124 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 CEBPZOSA8MTT3 80 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 SMLR1H3BR10 107 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 L7N2F9 121 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 MPC2O95563 127 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 MBPP02686 304 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 C1QBP02746 253 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 CRYGBP07316 175 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 HNRNPCP07910 306 aaKnown RBP eCLIP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 IL6RP08887 468 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 SRD5A1P18405 259 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 MAS1LP35410 378 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 HOXA1P49639 335 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 F2RL1P55085 397 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 SPCS3P61009 180 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 GNB1P62873 340 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 VAMP2P63027 116 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TNFRSF9Q07011 255 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 CD300CQ08708 224 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 IL15RAQ13261 267 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TNXAQ16473 311 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 LY6EQ16553 131 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 C5orf64Q2M2E5 130 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 AARDQ4LEZ3 155 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 CXorf66Q5JRM2 361 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-208ENST00000520561 PRSS54Q6PEW0 395 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 Q6YL49 198 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 PPP1R27Q86WC6 154 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 TMEM219Q86XT9 240 aa7.15□□□□□ -1.26
CSMD1-208ENST00000520561 MRPL41Q8IXM3 137 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms